Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
SP9P0CG40 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SP9P0CG40 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SP9P0CG40 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.16■□□□□ 0.34
SP9P0CG40 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SP9P0CG40 CU639417.3-201ENST00000624240 1404 ntBASIC17.16■□□□□ 0.34
SP9P0CG40 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SP9P0CG40 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SP9P0CG40 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SP9P0CG40 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
SP9P0CG40 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SP9P0CG40 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SP9P0CG40 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.16■□□□□ 0.34
SP9P0CG40 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SP9P0CG40 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.16■□□□□ 0.34
SP9P0CG40 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.16■□□□□ 0.34
SP9P0CG40 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SP9P0CG40 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SP9P0CG40 AC004233.3-201ENST00000607794 1269 ntBASIC17.16■□□□□ 0.34
SP9P0CG40 AC084121.4-201ENST00000641598 221 ntBASIC17.16■□□□□ 0.34
SP9P0CG40 AF228730.8-201ENST00000642140 221 ntBASIC17.16■□□□□ 0.34
SP9P0CG40 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.16■□□□□ 0.34
SP9P0CG40 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
SP9P0CG40 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SP9P0CG40 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SP9P0CG40 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.16■□□□□ 0.34
SP9P0CG40 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SP9P0CG40 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SP9P0CG40 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SP9P0CG40 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
SP9P0CG40 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SP9P0CG40 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SP9P0CG40 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SP9P0CG40 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.15■□□□□ 0.34
SP9P0CG40 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SP9P0CG40 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SP9P0CG40 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SP9P0CG40 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
SP9P0CG40 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SP9P0CG40 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SP9P0CG40 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SP9P0CG40 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SP9P0CG40 U91328.1-201ENST00000437528 223 ntBASIC17.15■□□□□ 0.34
SP9P0CG40 AC245100.3-201ENST00000441281 285 ntBASIC17.15■□□□□ 0.34
SP9P0CG40 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.15■□□□□ 0.34
SP9P0CG40 IGHV3-71-201ENST00000523324 359 ntBASIC17.15■□□□□ 0.34
SP9P0CG40 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.15■□□□□ 0.34
SP9P0CG40 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.15■□□□□ 0.34
SP9P0CG40 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SP9P0CG40 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SP9P0CG40 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SP9P0CG40 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SP9P0CG40 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SP9P0CG40 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SP9P0CG40 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SP9P0CG40 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SP9P0CG40 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SP9P0CG40 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.15■□□□□ 0.34
SP9P0CG40 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.34
SP9P0CG40 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SP9P0CG40 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SP9P0CG40 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SP9P0CG40 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SP9P0CG40 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.14■□□□□ 0.33
SP9P0CG40 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.14■□□□□ 0.33
SP9P0CG40 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SP9P0CG40 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.14■□□□□ 0.33
SP9P0CG40 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SP9P0CG40 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
SP9P0CG40 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SP9P0CG40 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SP9P0CG40 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SP9P0CG40 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SP9P0CG40 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SP9P0CG40 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SP9P0CG40 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.14■□□□□ 0.33
SP9P0CG40 GPR53P-205ENST00000457298 1084 ntBASIC17.14■□□□□ 0.33
SP9P0CG40 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.14■□□□□ 0.33
SP9P0CG40 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.14■□□□□ 0.33
SP9P0CG40 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.14■□□□□ 0.33
SP9P0CG40 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.14■□□□□ 0.33
SP9P0CG40 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.14■□□□□ 0.33
SP9P0CG40 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.14■□□□□ 0.33
SP9P0CG40 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SP9P0CG40 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SP9P0CG40 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SP9P0CG40 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SP9P0CG40 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SP9P0CG40 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SP9P0CG40 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.14■□□□□ 0.33
SP9P0CG40 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.14■□□□□ 0.33
SP9P0CG40 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
SP9P0CG40 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SP9P0CG40 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.14■□□□□ 0.33
SP9P0CG40 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SP9P0CG40 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SP9P0CG40 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.14■□□□□ 0.33
SP9P0CG40 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SP9P0CG40 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SP9P0CG40 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms