Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TPM3P06753 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.75■□□□□ 0.75
TPM3P06753 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TPM3P06753 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM3P06753 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM3P06753 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TPM3P06753 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.75■□□□□ 0.75
TPM3P06753 AP003041.3-201ENST00000527151 707 ntBASIC19.75■□□□□ 0.75
TPM3P06753 AP005242.2-201ENST00000580065 1175 ntBASIC19.75■□□□□ 0.75
TPM3P06753 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM3P06753 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.75■□□□□ 0.75
TPM3P06753 AP001412.1-201ENST00000608405 714 ntBASIC19.75■□□□□ 0.75
TPM3P06753 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM3P06753 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.75■□□□□ 0.75
TPM3P06753 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.75■□□□□ 0.75
TPM3P06753 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TPM3P06753 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.75■□□□□ 0.75
TPM3P06753 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
TPM3P06753 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM3P06753 AC016396.2-201ENST00000562575 1417 ntBASIC19.75■□□□□ 0.75
TPM3P06753 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM3P06753 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM3P06753 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM3P06753 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM3P06753 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TPM3P06753 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPM3P06753 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.74■□□□□ 0.75
TPM3P06753 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM3P06753 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM3P06753 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.74■□□□□ 0.75
TPM3P06753 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.74■□□□□ 0.75
TPM3P06753 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TPM3P06753 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TPM3P06753 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
TPM3P06753 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TPM3P06753 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TPM3P06753 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM3P06753 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM3P06753 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TPM3P06753 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.74■□□□□ 0.75
TPM3P06753 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM3P06753 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM3P06753 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM3P06753 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM3P06753 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM3P06753 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.74■□□□□ 0.75
TPM3P06753 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TPM3P06753 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM3P06753 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TPM3P06753 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
TPM3P06753 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TPM3P06753 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM3P06753 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.74■□□□□ 0.75
TPM3P06753 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.74■□□□□ 0.75
TPM3P06753 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TPM3P06753 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TPM3P06753 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TPM3P06753 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TPM3P06753 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.73■□□□□ 0.75
TPM3P06753 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TPM3P06753 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPM3P06753 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.73■□□□□ 0.75
TPM3P06753 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TPM3P06753 AC026691.1-201ENST00000602502 2017 ntBASIC19.73■□□□□ 0.75
TPM3P06753 MST1L-201ENST00000442552 2185 ntBASIC19.73■□□□□ 0.75
TPM3P06753 AL356309.3-201ENST00000624132 1934 ntBASIC19.73■□□□□ 0.75
TPM3P06753 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TPM3P06753 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPM3P06753 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPM3P06753 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPM3P06753 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.73■□□□□ 0.75
TPM3P06753 AL353719.1-201ENST00000566847 864 ntBASIC19.73■□□□□ 0.75
TPM3P06753 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.73■□□□□ 0.75
TPM3P06753 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
TPM3P06753 AL359736.2-201ENST00000621992 437 ntBASIC19.73■□□□□ 0.75
TPM3P06753 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPM3P06753 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TPM3P06753 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TPM3P06753 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TPM3P06753 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TPM3P06753 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
TPM3P06753 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.73■□□□□ 0.75
TPM3P06753 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPM3P06753 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TPM3P06753 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
TPM3P06753 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.72■□□□□ 0.75
TPM3P06753 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TPM3P06753 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TPM3P06753 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TPM3P06753 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM3P06753 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM3P06753 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TPM3P06753 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM3P06753 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
TPM3P06753 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TPM3P06753 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TPM3P06753 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM3P06753 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
TPM3P06753 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.72■□□□□ 0.75
TPM3P06753 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms