Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
POLR3DP05423 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.02■□□□□ 0.96
POLR3DP05423 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.02■□□□□ 0.96
POLR3DP05423 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
POLR3DP05423 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.02■□□□□ 0.96
POLR3DP05423 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
POLR3DP05423 RPS2P1-201ENST00000434010 821 ntBASIC21.02■□□□□ 0.96
POLR3DP05423 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.02■□□□□ 0.96
POLR3DP05423 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
POLR3DP05423 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.02■□□□□ 0.96
POLR3DP05423 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
POLR3DP05423 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
POLR3DP05423 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.02■□□□□ 0.96
POLR3DP05423 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
POLR3DP05423 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.02■□□□□ 0.96
POLR3DP05423 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
POLR3DP05423 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
POLR3DP05423 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
POLR3DP05423 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.02■□□□□ 0.96
POLR3DP05423 IL9RP2-201ENST00000423948 1312 ntBASIC21.02■□□□□ 0.95
POLR3DP05423 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
POLR3DP05423 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
POLR3DP05423 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR3DP05423 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
POLR3DP05423 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.01■□□□□ 0.95
POLR3DP05423 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
POLR3DP05423 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR3DP05423 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR3DP05423 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR3DP05423 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR3DP05423 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.01■□□□□ 0.95
POLR3DP05423 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
POLR3DP05423 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
POLR3DP05423 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR3DP05423 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR3DP05423 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR3DP05423 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR3DP05423 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.01■□□□□ 0.95
POLR3DP05423 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
POLR3DP05423 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR3DP05423 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR3DP05423 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.01■□□□□ 0.95
POLR3DP05423 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.01■□□□□ 0.95
POLR3DP05423 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.01■□□□□ 0.95
POLR3DP05423 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.01■□□□□ 0.95
POLR3DP05423 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.01■□□□□ 0.95
POLR3DP05423 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR3DP05423 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR3DP05423 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR3DP05423 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.01■□□□□ 0.95
POLR3DP05423 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.01■□□□□ 0.95
POLR3DP05423 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
POLR3DP05423 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.01■□□□□ 0.95
POLR3DP05423 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR3DP05423 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.01■□□□□ 0.95
POLR3DP05423 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC21■□□□□ 0.95
POLR3DP05423 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21■□□□□ 0.95
POLR3DP05423 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
POLR3DP05423 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
POLR3DP05423 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
POLR3DP05423 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
POLR3DP05423 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21■□□□□ 0.95
POLR3DP05423 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21■□□□□ 0.95
POLR3DP05423 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC21■□□□□ 0.95
POLR3DP05423 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21■□□□□ 0.95
POLR3DP05423 BX005266.1-201ENST00000473402 457 ntBASIC21■□□□□ 0.95
POLR3DP05423 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21■□□□□ 0.95
POLR3DP05423 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21■□□□□ 0.95
POLR3DP05423 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21■□□□□ 0.95
POLR3DP05423 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21■□□□□ 0.95
POLR3DP05423 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21■□□□□ 0.95
POLR3DP05423 MTDHP4-201ENST00000600287 670 ntBASIC21■□□□□ 0.95
POLR3DP05423 MIR7706-201ENST00000613747 67 ntBASIC21■□□□□ 0.95
POLR3DP05423 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
POLR3DP05423 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21■□□□□ 0.95
POLR3DP05423 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
POLR3DP05423 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
POLR3DP05423 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21■□□□□ 0.95
POLR3DP05423 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
POLR3DP05423 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
POLR3DP05423 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
POLR3DP05423 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
POLR3DP05423 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21■□□□□ 0.95
POLR3DP05423 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21■□□□□ 0.95
POLR3DP05423 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
POLR3DP05423 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
POLR3DP05423 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
POLR3DP05423 AC090340.1-201ENST00000620778 4980 ntBASIC20.99■□□□□ 0.95
POLR3DP05423 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR3DP05423 AC243591.1-201ENST00000452967 1364 ntBASIC20.99■□□□□ 0.95
POLR3DP05423 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.99■□□□□ 0.95
POLR3DP05423 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
POLR3DP05423 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
POLR3DP05423 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.99■□□□□ 0.95
POLR3DP05423 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.99■□□□□ 0.95
POLR3DP05423 AC134043.2-201ENST00000624206 2238 ntBASIC20.99■□□□□ 0.95
POLR3DP05423 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
POLR3DP05423 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
POLR3DP05423 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
POLR3DP05423 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms