Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TOMM40O96008 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TOMM40O96008 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TOMM40O96008 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TOMM40O96008 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC13.81□□□□□ -0.2
TOMM40O96008 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TOMM40O96008 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TOMM40O96008 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TOMM40O96008 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TOMM40O96008 AL391807.1-203ENST00000604392 2365 ntBASIC13.81□□□□□ -0.2
TOMM40O96008 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TOMM40O96008 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TOMM40O96008 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
TOMM40O96008 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TOMM40O96008 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
TOMM40O96008 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TOMM40O96008 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.81□□□□□ -0.2
TOMM40O96008 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TOMM40O96008 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
TOMM40O96008 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TOMM40O96008 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.81□□□□□ -0.2
TOMM40O96008 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.81□□□□□ -0.2
TOMM40O96008 KRT18P48-201ENST00000434763 852 ntBASIC13.81□□□□□ -0.2
TOMM40O96008 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
TOMM40O96008 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.81□□□□□ -0.2
TOMM40O96008 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TOMM40O96008 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.81□□□□□ -0.2
TOMM40O96008 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.81□□□□□ -0.2
TOMM40O96008 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TOMM40O96008 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.81□□□□□ -0.2
TOMM40O96008 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TOMM40O96008 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
TOMM40O96008 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TOMM40O96008 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TOMM40O96008 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TOMM40O96008 KRT8P47-201ENST00000604727 1398 ntBASIC13.81□□□□□ -0.2
TOMM40O96008 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TOMM40O96008 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TOMM40O96008 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TOMM40O96008 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TOMM40O96008 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
TOMM40O96008 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.81□□□□□ -0.2
TOMM40O96008 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.8□□□□□ -0.2
TOMM40O96008 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.8□□□□□ -0.2
TOMM40O96008 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.8□□□□□ -0.2
TOMM40O96008 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.8□□□□□ -0.2
TOMM40O96008 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.8□□□□□ -0.2
TOMM40O96008 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.8□□□□□ -0.2
TOMM40O96008 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.8□□□□□ -0.2
TOMM40O96008 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.8□□□□□ -0.2
TOMM40O96008 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 AC022211.2-201ENST00000585075 2527 ntBASIC13.8□□□□□ -0.2
TOMM40O96008 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.8□□□□□ -0.2
TOMM40O96008 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TOMM40O96008 SLC25A3P1-201ENST00000443844 931 ntBASIC13.8□□□□□ -0.2
TOMM40O96008 ATP5G1P1-201ENST00000448724 379 ntBASIC13.8□□□□□ -0.2
TOMM40O96008 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.8□□□□□ -0.2
TOMM40O96008 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.8□□□□□ -0.2
TOMM40O96008 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.8□□□□□ -0.2
TOMM40O96008 AC009154.2-201ENST00000621177 724 ntBASIC13.8□□□□□ -0.2
TOMM40O96008 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.8□□□□□ -0.2
TOMM40O96008 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 NKILA-202ENST00000614771 2598 ntBASIC13.8□□□□□ -0.2
TOMM40O96008 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TOMM40O96008 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.8□□□□□ -0.2
TOMM40O96008 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.8□□□□□ -0.2
TOMM40O96008 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TOMM40O96008 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.8□□□□□ -0.2
TOMM40O96008 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
TOMM40O96008 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TOMM40O96008 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TOMM40O96008 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TOMM40O96008 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.79□□□□□ -0.2
TOMM40O96008 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TOMM40O96008 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms