Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT4O95628 COX5BP2-201ENST00000392354 334 ntBASIC15.66■□□□□ 0.1
CNOT4O95628 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CNOT4O95628 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.66■□□□□ 0.1
CNOT4O95628 RBM17P3-201ENST00000417687 1192 ntBASIC15.66■□□□□ 0.1
CNOT4O95628 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT4O95628 AC007967.3-201ENST00000434308 558 ntBASIC15.66■□□□□ 0.1
CNOT4O95628 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.66■□□□□ 0.1
CNOT4O95628 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.66■□□□□ 0.1
CNOT4O95628 AC106795.1-205ENST00000512851 1056 ntBASIC15.66■□□□□ 0.1
CNOT4O95628 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.66■□□□□ 0.1
CNOT4O95628 REXO1L6P-202ENST00000619970 1078 ntBASIC15.66■□□□□ 0.1
CNOT4O95628 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.66■□□□□ 0.1
CNOT4O95628 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT4O95628 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT4O95628 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.66■□□□□ 0.1
CNOT4O95628 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT4O95628 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CNOT4O95628 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.66■□□□□ 0.1
CNOT4O95628 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT4O95628 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CNOT4O95628 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CNOT4O95628 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.66■□□□□ 0.1
CNOT4O95628 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CNOT4O95628 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.66■□□□□ 0.1
CNOT4O95628 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.66■□□□□ 0.1
CNOT4O95628 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CNOT4O95628 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.65■□□□□ 0.1
CNOT4O95628 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.65■□□□□ 0.1
CNOT4O95628 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.65■□□□□ 0.1
CNOT4O95628 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.65■□□□□ 0.1
CNOT4O95628 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.65■□□□□ 0.1
CNOT4O95628 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.65■□□□□ 0.1
CNOT4O95628 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.65■□□□□ 0.1
CNOT4O95628 SAPCD2P3-201ENST00000455031 850 ntBASIC15.65■□□□□ 0.1
CNOT4O95628 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CNOT4O95628 SLC25A6P4-201ENST00000586535 553 ntBASIC15.65■□□□□ 0.1
CNOT4O95628 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.65■□□□□ 0.1
CNOT4O95628 AL121912.1-201ENST00000603683 238 ntBASIC15.65■□□□□ 0.1
CNOT4O95628 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.65■□□□□ 0.1
CNOT4O95628 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.65■□□□□ 0.1
CNOT4O95628 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CNOT4O95628 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.65■□□□□ 0.1
CNOT4O95628 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CNOT4O95628 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CNOT4O95628 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.65■□□□□ 0.1
CNOT4O95628 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CNOT4O95628 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CNOT4O95628 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CNOT4O95628 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CNOT4O95628 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
CNOT4O95628 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.64■□□□□ 0.09
CNOT4O95628 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CNOT4O95628 AC138028.4-201ENST00000564984 1845 ntBASIC15.64■□□□□ 0.09
CNOT4O95628 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.64■□□□□ 0.09
CNOT4O95628 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CNOT4O95628 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CNOT4O95628 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CNOT4O95628 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CNOT4O95628 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CNOT4O95628 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CNOT4O95628 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.64■□□□□ 0.09
CNOT4O95628 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CNOT4O95628 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.64■□□□□ 0.09
CNOT4O95628 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.64■□□□□ 0.09
CNOT4O95628 SLC25A6P5-201ENST00000435663 894 ntBASIC15.64■□□□□ 0.09
CNOT4O95628 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CNOT4O95628 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CNOT4O95628 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.64■□□□□ 0.09
CNOT4O95628 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.64■□□□□ 0.09
CNOT4O95628 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
CNOT4O95628 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.64■□□□□ 0.09
CNOT4O95628 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.64■□□□□ 0.09
CNOT4O95628 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms