Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.5■□□□□ 0.71
CLSTN1O94985 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.5■□□□□ 0.71
CLSTN1O94985 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CLSTN1O94985 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLSTN1O94985 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLSTN1O94985 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLSTN1O94985 MIR662-201ENST00000384847 95 ntBASIC19.5■□□□□ 0.71
CLSTN1O94985 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLSTN1O94985 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLSTN1O94985 TSPY22P-201ENST00000427496 604 ntBASIC19.5■□□□□ 0.71
CLSTN1O94985 SPDYE13P-201ENST00000445314 798 ntBASIC19.5■□□□□ 0.71
CLSTN1O94985 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.5■□□□□ 0.71
CLSTN1O94985 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.5■□□□□ 0.71
CLSTN1O94985 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.5■□□□□ 0.71
CLSTN1O94985 AL136038.3-201ENST00000561909 1096 ntBASIC19.5■□□□□ 0.71
CLSTN1O94985 RNF126P1-202ENST00000569893 925 ntBASIC19.5■□□□□ 0.71
CLSTN1O94985 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.5■□□□□ 0.71
CLSTN1O94985 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CLSTN1O94985 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.5■□□□□ 0.71
CLSTN1O94985 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.5■□□□□ 0.71
CLSTN1O94985 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLSTN1O94985 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLSTN1O94985 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLSTN1O94985 AC068587.6-202ENST00000641839 5619 ntBASIC19.5■□□□□ 0.71
CLSTN1O94985 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
CLSTN1O94985 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLSTN1O94985 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLSTN1O94985 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLSTN1O94985 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLSTN1O94985 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.49■□□□□ 0.71
CLSTN1O94985 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLSTN1O94985 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CLSTN1O94985 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLSTN1O94985 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLSTN1O94985 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLSTN1O94985 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLSTN1O94985 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLSTN1O94985 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLSTN1O94985 IGHGP-201ENST00000390555 1178 ntBASIC19.49■□□□□ 0.71
CLSTN1O94985 BX276092.5-203ENST00000456199 560 ntBASIC19.49■□□□□ 0.71
CLSTN1O94985 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.49■□□□□ 0.71
CLSTN1O94985 AC011498.5-201ENST00000592027 486 ntBASIC19.49■□□□□ 0.71
CLSTN1O94985 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
CLSTN1O94985 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLSTN1O94985 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CLSTN1O94985 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.49■□□□□ 0.71
CLSTN1O94985 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CLSTN1O94985 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CLSTN1O94985 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLSTN1O94985 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.49■□□□□ 0.71
CLSTN1O94985 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLSTN1O94985 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
CLSTN1O94985 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CLSTN1O94985 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CLSTN1O94985 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLSTN1O94985 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.48■□□□□ 0.71
CLSTN1O94985 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLSTN1O94985 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.48■□□□□ 0.71
CLSTN1O94985 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CLSTN1O94985 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CLSTN1O94985 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLSTN1O94985 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLSTN1O94985 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLSTN1O94985 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLSTN1O94985 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLSTN1O94985 AL353692.3-201ENST00000407031 1396 ntBASIC19.48■□□□□ 0.71
CLSTN1O94985 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CLSTN1O94985 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.48■□□□□ 0.71
CLSTN1O94985 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLSTN1O94985 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.48■□□□□ 0.71
CLSTN1O94985 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CLSTN1O94985 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.48■□□□□ 0.71
CLSTN1O94985 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.48■□□□□ 0.71
CLSTN1O94985 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLSTN1O94985 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.48■□□□□ 0.71
CLSTN1O94985 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLSTN1O94985 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CLSTN1O94985 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLSTN1O94985 AC139713.2-201ENST00000641328 2723 ntBASIC19.48■□□□□ 0.71
CLSTN1O94985 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLSTN1O94985 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CLSTN1O94985 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLSTN1O94985 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CLSTN1O94985 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.47■□□□□ 0.71
CLSTN1O94985 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CLSTN1O94985 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.47■□□□□ 0.71
CLSTN1O94985 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLSTN1O94985 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLSTN1O94985 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLSTN1O94985 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CLSTN1O94985 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLSTN1O94985 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLSTN1O94985 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLSTN1O94985 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLSTN1O94985 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLSTN1O94985 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLSTN1O94985 FAM86EP-206ENST00000510506 987 ntBASIC19.47■□□□□ 0.71
CLSTN1O94985 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.47■□□□□ 0.71
CLSTN1O94985 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.47■□□□□ 0.71
CLSTN1O94985 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms