Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.92■□□□□ 0.3
GFRA3O60609 AC119751.2-201ENST00000504529 210 ntBASIC16.92■□□□□ 0.3
GFRA3O60609 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.92■□□□□ 0.3
GFRA3O60609 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.92■□□□□ 0.3
GFRA3O60609 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.92■□□□□ 0.3
GFRA3O60609 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.92■□□□□ 0.3
GFRA3O60609 AC103810.3-201ENST00000583567 96 ntBASIC16.92■□□□□ 0.3
GFRA3O60609 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.92■□□□□ 0.3
GFRA3O60609 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC16.92■□□□□ 0.3
GFRA3O60609 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.92■□□□□ 0.3
GFRA3O60609 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA3O60609 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.92■□□□□ 0.3
GFRA3O60609 AC093677.2-201ENST00000600169 1863 ntBASIC16.92■□□□□ 0.3
GFRA3O60609 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA3O60609 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA3O60609 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GFRA3O60609 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
GFRA3O60609 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA3O60609 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA3O60609 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
GFRA3O60609 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA3O60609 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
GFRA3O60609 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
GFRA3O60609 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA3O60609 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.91■□□□□ 0.3
GFRA3O60609 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.91■□□□□ 0.3
GFRA3O60609 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA3O60609 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.91■□□□□ 0.3
GFRA3O60609 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.91■□□□□ 0.3
GFRA3O60609 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA3O60609 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA3O60609 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.91■□□□□ 0.3
GFRA3O60609 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA3O60609 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.91■□□□□ 0.3
GFRA3O60609 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.91■□□□□ 0.3
GFRA3O60609 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.91■□□□□ 0.3
GFRA3O60609 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.91■□□□□ 0.3
GFRA3O60609 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.91■□□□□ 0.3
GFRA3O60609 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.91■□□□□ 0.3
GFRA3O60609 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.91■□□□□ 0.3
GFRA3O60609 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.91■□□□□ 0.3
GFRA3O60609 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.91■□□□□ 0.3
GFRA3O60609 SPDYE12P-201ENST00000618416 771 ntBASIC16.91■□□□□ 0.3
GFRA3O60609 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.91■□□□□ 0.3
GFRA3O60609 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA3O60609 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA3O60609 AC099778.1-201ENST00000568593 1911 ntBASIC16.91■□□□□ 0.3
GFRA3O60609 AC018445.3-201ENST00000624177 1945 ntBASIC16.91■□□□□ 0.3
GFRA3O60609 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.91■□□□□ 0.3
GFRA3O60609 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
GFRA3O60609 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.91■□□□□ 0.3
GFRA3O60609 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.91■□□□□ 0.3
GFRA3O60609 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA3O60609 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA3O60609 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA3O60609 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA3O60609 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.91■□□□□ 0.3
GFRA3O60609 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
GFRA3O60609 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.91■□□□□ 0.3
GFRA3O60609 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.91■□□□□ 0.3
GFRA3O60609 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GFRA3O60609 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA3O60609 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA3O60609 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA3O60609 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
GFRA3O60609 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA3O60609 TTTY23B-201ENST00000442790 549 ntBASIC16.9■□□□□ 0.3
GFRA3O60609 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.9■□□□□ 0.3
GFRA3O60609 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GFRA3O60609 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.9■□□□□ 0.3
GFRA3O60609 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA3O60609 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
GFRA3O60609 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA3O60609 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA3O60609 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA3O60609 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA3O60609 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA3O60609 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA3O60609 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA3O60609 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA3O60609 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA3O60609 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA3O60609 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GFRA3O60609 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GFRA3O60609 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
GFRA3O60609 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.3
GFRA3O60609 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.89■□□□□ 0.3
GFRA3O60609 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GFRA3O60609 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
GFRA3O60609 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.89■□□□□ 0.29
GFRA3O60609 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GFRA3O60609 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
GFRA3O60609 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GFRA3O60609 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GFRA3O60609 AC087499.6-201ENST00000411576 835 ntBASIC16.89■□□□□ 0.29
GFRA3O60609 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.89■□□□□ 0.29
GFRA3O60609 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.89■□□□□ 0.29
GFRA3O60609 AL138828.2-201ENST00000615812 383 ntBASIC16.89■□□□□ 0.29
GFRA3O60609 MIR6869-201ENST00000619434 62 ntBASIC16.89■□□□□ 0.29
GFRA3O60609 AL109936.8-201ENST00000641772 604 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms