Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 ALG1L8P-201ENST00000533887 760 ntBASIC21.24■□□□□ 0.99
GRIN3BO60391 THTPA-204ENST00000554970 569 ntTSL 4 BASIC21.24■□□□□ 0.99
GRIN3BO60391 THTPA-206ENST00000556015 535 ntTSL 3 BASIC21.24■□□□□ 0.99
GRIN3BO60391 AC109462.3-201ENST00000573934 613 ntBASIC21.24■□□□□ 0.99
GRIN3BO60391 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC21.24■□□□□ 0.99
GRIN3BO60391 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC21.24■□□□□ 0.99
GRIN3BO60391 AC068587.10-201ENST00000641210 219 ntBASIC21.24■□□□□ 0.99
GRIN3BO60391 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GRIN3BO60391 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.24■□□□□ 0.99
GRIN3BO60391 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
GRIN3BO60391 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
GRIN3BO60391 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GRIN3BO60391 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GRIN3BO60391 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.24■□□□□ 0.99
GRIN3BO60391 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
GRIN3BO60391 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.23■□□□□ 0.99
GRIN3BO60391 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.23■□□□□ 0.99
GRIN3BO60391 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC21.23■□□□□ 0.99
GRIN3BO60391 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC21.23■□□□□ 0.99
GRIN3BO60391 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
GRIN3BO60391 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GRIN3BO60391 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GRIN3BO60391 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC21.23■□□□□ 0.99
GRIN3BO60391 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
GRIN3BO60391 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC21.23■□□□□ 0.99
GRIN3BO60391 INE1-201ENST00000456273 945 ntBASIC21.23■□□□□ 0.99
GRIN3BO60391 PARP8-206ENST00000503665 572 ntTSL 4 BASIC21.23■□□□□ 0.99
GRIN3BO60391 RAB43P1-201ENST00000561790 589 ntBASIC21.23■□□□□ 0.99
GRIN3BO60391 AC140912.1-201ENST00000577171 1054 ntBASIC21.23■□□□□ 0.99
GRIN3BO60391 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
GRIN3BO60391 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GRIN3BO60391 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC21.23■□□□□ 0.99
GRIN3BO60391 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GRIN3BO60391 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GRIN3BO60391 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.23■□□□□ 0.99
GRIN3BO60391 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GRIN3BO60391 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.23■□□□□ 0.99
GRIN3BO60391 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.23■□□□□ 0.99
GRIN3BO60391 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GRIN3BO60391 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GRIN3BO60391 AC009336.1-201ENST00000608941 1553 ntBASIC21.23■□□□□ 0.99
GRIN3BO60391 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GRIN3BO60391 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GRIN3BO60391 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GRIN3BO60391 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
GRIN3BO60391 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GRIN3BO60391 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
GRIN3BO60391 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
GRIN3BO60391 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GRIN3BO60391 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
GRIN3BO60391 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.22■□□□□ 0.99
GRIN3BO60391 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
GRIN3BO60391 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GRIN3BO60391 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
GRIN3BO60391 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC21.22■□□□□ 0.99
GRIN3BO60391 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
GRIN3BO60391 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GRIN3BO60391 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GRIN3BO60391 AL512384.1-201ENST00000406683 331 ntBASIC21.22■□□□□ 0.99
GRIN3BO60391 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC21.22■□□□□ 0.99
GRIN3BO60391 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
GRIN3BO60391 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GRIN3BO60391 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC21.22■□□□□ 0.99
GRIN3BO60391 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC21.22■□□□□ 0.99
GRIN3BO60391 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GRIN3BO60391 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GRIN3BO60391 PACS1-203ENST00000524815 628 ntTSL 4 BASIC21.22■□□□□ 0.99
GRIN3BO60391 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC21.22■□□□□ 0.99
GRIN3BO60391 KRT17P8-201ENST00000540749 863 ntBASIC21.22■□□□□ 0.99
GRIN3BO60391 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
GRIN3BO60391 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
GRIN3BO60391 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
GRIN3BO60391 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
GRIN3BO60391 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GRIN3BO60391 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GRIN3BO60391 AL590787.1-201ENST00000568856 1315 ntBASIC21.22■□□□□ 0.99
GRIN3BO60391 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GRIN3BO60391 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GRIN3BO60391 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GRIN3BO60391 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GRIN3BO60391 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GRIN3BO60391 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.21■□□□□ 0.99
GRIN3BO60391 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.21■□□□□ 0.99
GRIN3BO60391 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GRIN3BO60391 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
GRIN3BO60391 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
GRIN3BO60391 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GRIN3BO60391 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GRIN3BO60391 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
GRIN3BO60391 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GRIN3BO60391 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC21.21■□□□□ 0.99
GRIN3BO60391 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC21.21■□□□□ 0.99
GRIN3BO60391 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
GRIN3BO60391 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
GRIN3BO60391 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GRIN3BO60391 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
GRIN3BO60391 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GRIN3BO60391 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GRIN3BO60391 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC21.21■□□□□ 0.99
GRIN3BO60391 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms