Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX4O60224 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SSX4O60224 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX4O60224 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
SSX4O60224 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX4O60224 AC006116.8-202ENST00000587620 1550 ntBASIC16.01■□□□□ 0.15
SSX4O60224 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX4O60224 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX4O60224 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX4O60224 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SSX4O60224 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SSX4O60224 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SSX4O60224 AC092850.2-201ENST00000623821 2697 ntBASIC16.01■□□□□ 0.15
SSX4O60224 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SSX4O60224 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
SSX4O60224 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
SSX4O60224 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.01■□□□□ 0.15
SSX4O60224 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.01■□□□□ 0.15
SSX4O60224 ZNF444P1-201ENST00000559497 298 ntBASIC16.01■□□□□ 0.15
SSX4O60224 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SSX4O60224 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.01■□□□□ 0.15
SSX4O60224 AL121894.2-201ENST00000602977 491 ntBASIC16.01■□□□□ 0.15
SSX4O60224 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.01■□□□□ 0.15
SSX4O60224 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
SSX4O60224 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX4O60224 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SSX4O60224 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX4O60224 FER1L4-210ENST00000615531 5998 ntBASIC16.01■□□□□ 0.15
SSX4O60224 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX4O60224 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.01■□□□□ 0.15
SSX4O60224 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX4O60224 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX4O60224 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX4O60224 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.01■□□□□ 0.15
SSX4O60224 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16■□□□□ 0.15
SSX4O60224 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16■□□□□ 0.15
SSX4O60224 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSX4O60224 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SSX4O60224 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16■□□□□ 0.15
SSX4O60224 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16■□□□□ 0.15
SSX4O60224 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSX4O60224 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16■□□□□ 0.15
SSX4O60224 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16■□□□□ 0.15
SSX4O60224 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16■□□□□ 0.15
SSX4O60224 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16■□□□□ 0.15
SSX4O60224 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSX4O60224 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16■□□□□ 0.15
SSX4O60224 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
SSX4O60224 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSX4O60224 AGGF1P2-201ENST00000426656 2106 ntBASIC16■□□□□ 0.15
SSX4O60224 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SSX4O60224 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16■□□□□ 0.15
SSX4O60224 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
SSX4O60224 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16■□□□□ 0.15
SSX4O60224 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16■□□□□ 0.15
SSX4O60224 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSX4O60224 HLA-DQB1-201ENST00000374943 1656 ntBASIC16■□□□□ 0.15
SSX4O60224 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16■□□□□ 0.15
SSX4O60224 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SSX4O60224 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
SSX4O60224 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16■□□□□ 0.15
SSX4O60224 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SSX4O60224 STARP1-201ENST00000397973 869 ntBASIC16■□□□□ 0.15
SSX4O60224 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16■□□□□ 0.15
SSX4O60224 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16■□□□□ 0.15
SSX4O60224 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16■□□□□ 0.15
SSX4O60224 AL136038.3-201ENST00000561909 1096 ntBASIC16■□□□□ 0.15
SSX4O60224 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16■□□□□ 0.15
SSX4O60224 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16■□□□□ 0.15
SSX4O60224 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16■□□□□ 0.15
SSX4O60224 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16■□□□□ 0.15
SSX4O60224 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSX4O60224 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SSX4O60224 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
SSX4O60224 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16■□□□□ 0.15
SSX4O60224 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16■□□□□ 0.15
SSX4O60224 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSX4O60224 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16■□□□□ 0.15
SSX4O60224 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSX4O60224 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
SSX4O60224 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX4O60224 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SSX4O60224 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SSX4O60224 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX4O60224 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX4O60224 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.99■□□□□ 0.15
SSX4O60224 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SSX4O60224 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX4O60224 AC106886.4-201ENST00000623557 2502 ntBASIC15.99■□□□□ 0.15
SSX4O60224 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX4O60224 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SSX4O60224 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX4O60224 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX4O60224 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SSX4O60224 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX4O60224 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SSX4O60224 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX4O60224 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.99■□□□□ 0.15
SSX4O60224 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SSX4O60224 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms