Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
LDB2O43679 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LDB2O43679 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LDB2O43679 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
LDB2O43679 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.58■□□□□ 0.4
LDB2O43679 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.58■□□□□ 0.4
LDB2O43679 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LDB2O43679 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.58■□□□□ 0.4
LDB2O43679 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LDB2O43679 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
LDB2O43679 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.58■□□□□ 0.4
LDB2O43679 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
LDB2O43679 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LDB2O43679 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LDB2O43679 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDB2O43679 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.57■□□□□ 0.4
LDB2O43679 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDB2O43679 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LDB2O43679 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
LDB2O43679 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.57■□□□□ 0.4
LDB2O43679 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.57■□□□□ 0.4
LDB2O43679 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.57■□□□□ 0.4
LDB2O43679 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDB2O43679 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDB2O43679 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LDB2O43679 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDB2O43679 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDB2O43679 MYCLP1-201ENST00000372451 1075 ntBASIC17.57■□□□□ 0.4
LDB2O43679 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.57■□□□□ 0.4
LDB2O43679 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LDB2O43679 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LDB2O43679 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.57■□□□□ 0.4
LDB2O43679 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.57■□□□□ 0.4
LDB2O43679 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.57■□□□□ 0.4
LDB2O43679 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.57■□□□□ 0.4
LDB2O43679 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.57■□□□□ 0.4
LDB2O43679 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
LDB2O43679 AC114341.1-201ENST00000618070 349 ntBASIC17.57■□□□□ 0.4
LDB2O43679 AD001527.2-201ENST00000622994 785 ntBASIC17.57■□□□□ 0.4
LDB2O43679 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LDB2O43679 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LDB2O43679 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDB2O43679 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDB2O43679 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDB2O43679 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDB2O43679 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.57■□□□□ 0.4
LDB2O43679 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDB2O43679 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LDB2O43679 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LDB2O43679 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LDB2O43679 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.56■□□□□ 0.4
LDB2O43679 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.56■□□□□ 0.4
LDB2O43679 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.56■□□□□ 0.4
LDB2O43679 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.56■□□□□ 0.4
LDB2O43679 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.56■□□□□ 0.4
LDB2O43679 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LDB2O43679 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LDB2O43679 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LDB2O43679 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LDB2O43679 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LDB2O43679 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LDB2O43679 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LDB2O43679 POM121L3P-201ENST00000419331 1163 ntBASIC17.56■□□□□ 0.4
LDB2O43679 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.56■□□□□ 0.4
LDB2O43679 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.56■□□□□ 0.4
LDB2O43679 AC099336.1-202ENST00000602961 463 ntBASIC17.56■□□□□ 0.4
LDB2O43679 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.56■□□□□ 0.4
LDB2O43679 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.56■□□□□ 0.4
LDB2O43679 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LDB2O43679 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LDB2O43679 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LDB2O43679 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LDB2O43679 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LDB2O43679 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LDB2O43679 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LDB2O43679 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.56■□□□□ 0.4
LDB2O43679 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LDB2O43679 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.56■□□□□ 0.4
LDB2O43679 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LDB2O43679 AC016396.2-201ENST00000562575 1417 ntBASIC17.55■□□□□ 0.4
LDB2O43679 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.55■□□□□ 0.4
LDB2O43679 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LDB2O43679 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LDB2O43679 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.55■□□□□ 0.4
LDB2O43679 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LDB2O43679 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.55■□□□□ 0.4
LDB2O43679 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LDB2O43679 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.55■□□□□ 0.4
LDB2O43679 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LDB2O43679 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.55■□□□□ 0.4
LDB2O43679 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LDB2O43679 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LDB2O43679 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LDB2O43679 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.55■□□□□ 0.4
LDB2O43679 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.55■□□□□ 0.4
LDB2O43679 AC111152.3-201ENST00000569699 673 ntBASIC17.55■□□□□ 0.4
LDB2O43679 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.55■□□□□ 0.4
LDB2O43679 STK25P1-201ENST00000585406 838 ntBASIC17.55■□□□□ 0.4
LDB2O43679 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.55■□□□□ 0.4
LDB2O43679 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms