Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.79■□□□□ 0.44
AP3B1O00203 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
AP3B1O00203 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.79■□□□□ 0.44
AP3B1O00203 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3B1O00203 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3B1O00203 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3B1O00203 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP3B1O00203 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3B1O00203 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3B1O00203 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.79■□□□□ 0.44
AP3B1O00203 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.79■□□□□ 0.44
AP3B1O00203 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
AP3B1O00203 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP3B1O00203 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.79■□□□□ 0.44
AP3B1O00203 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3B1O00203 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP3B1O00203 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3B1O00203 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3B1O00203 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3B1O00203 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP3B1O00203 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP3B1O00203 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3B1O00203 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP3B1O00203 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP3B1O00203 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP3B1O00203 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3B1O00203 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.78■□□□□ 0.44
AP3B1O00203 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.78■□□□□ 0.44
AP3B1O00203 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.78■□□□□ 0.44
AP3B1O00203 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.78■□□□□ 0.44
AP3B1O00203 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
AP3B1O00203 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
AP3B1O00203 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.78■□□□□ 0.44
AP3B1O00203 IGHV3-41-201ENST00000613121 348 ntBASIC17.78■□□□□ 0.44
AP3B1O00203 AC124864.1-201ENST00000623408 392 ntBASIC17.78■□□□□ 0.44
AP3B1O00203 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP3B1O00203 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.78■□□□□ 0.44
AP3B1O00203 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
AP3B1O00203 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP3B1O00203 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3B1O00203 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP3B1O00203 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP3B1O00203 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
AP3B1O00203 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3B1O00203 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3B1O00203 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP3B1O00203 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.78■□□□□ 0.44
AP3B1O00203 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
AP3B1O00203 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP3B1O00203 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
AP3B1O00203 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.77■□□□□ 0.44
AP3B1O00203 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.77■□□□□ 0.44
AP3B1O00203 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
AP3B1O00203 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP3B1O00203 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
AP3B1O00203 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
AP3B1O00203 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP3B1O00203 VENTXP7-201ENST00000475503 772 ntBASIC17.77■□□□□ 0.44
AP3B1O00203 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.77■□□□□ 0.44
AP3B1O00203 AL592071.1-201ENST00000611956 408 ntBASIC17.77■□□□□ 0.44
AP3B1O00203 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.77■□□□□ 0.44
AP3B1O00203 AC125634.1-201ENST00000438758 1403 ntBASIC17.77■□□□□ 0.44
AP3B1O00203 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP3B1O00203 AC010460.3-201ENST00000511359 1579 ntBASIC17.77■□□□□ 0.44
AP3B1O00203 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP3B1O00203 AP001094.4-201ENST00000579008 2176 ntBASIC17.77■□□□□ 0.43
AP3B1O00203 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AP3B1O00203 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AP3B1O00203 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
AP3B1O00203 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3B1O00203 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AP3B1O00203 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.76■□□□□ 0.43
AP3B1O00203 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
AP3B1O00203 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
AP3B1O00203 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3B1O00203 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3B1O00203 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.76■□□□□ 0.43
AP3B1O00203 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3B1O00203 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
AP3B1O00203 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3B1O00203 AC007967.3-201ENST00000434308 558 ntBASIC17.76■□□□□ 0.43
AP3B1O00203 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.76■□□□□ 0.43
AP3B1O00203 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3B1O00203 AC111152.3-201ENST00000569699 673 ntBASIC17.76■□□□□ 0.43
AP3B1O00203 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.76■□□□□ 0.43
AP3B1O00203 AL121956.5-201ENST00000625261 221 ntBASIC17.76■□□□□ 0.43
AP3B1O00203 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.76■□□□□ 0.43
AP3B1O00203 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3B1O00203 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3B1O00203 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3B1O00203 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3B1O00203 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3B1O00203 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
AP3B1O00203 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3B1O00203 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.76■□□□□ 0.43
AP3B1O00203 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3B1O00203 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.76■□□□□ 0.43
AP3B1O00203 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP3B1O00203 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.75■□□□□ 0.43
AP3B1O00203 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms