Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.72■□□□□ 0.27
LRIT2A6NDA9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRIT2A6NDA9 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.71■□□□□ 0.27
LRIT2A6NDA9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 KRT18P56-201ENST00000507275 550 ntBASIC16.71■□□□□ 0.27
LRIT2A6NDA9 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.71■□□□□ 0.27
LRIT2A6NDA9 AL121772.3-201ENST00000610840 674 ntBASIC16.71■□□□□ 0.27
LRIT2A6NDA9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
LRIT2A6NDA9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
LRIT2A6NDA9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LRIT2A6NDA9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 TSPY19P-201ENST00000418461 509 ntBASIC16.7■□□□□ 0.26
LRIT2A6NDA9 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 TSPY18P-201ENST00000441642 509 ntBASIC16.7■□□□□ 0.26
LRIT2A6NDA9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 PRELID1P1-202ENST00000567272 903 ntBASIC16.7■□□□□ 0.26
LRIT2A6NDA9 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 STK25P1-201ENST00000585406 838 ntBASIC16.7■□□□□ 0.26
LRIT2A6NDA9 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.7■□□□□ 0.26
LRIT2A6NDA9 AC141586.5-201ENST00000624546 2050 ntBASIC16.69■□□□□ 0.26
LRIT2A6NDA9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 PMPCAP1-201ENST00000508114 1576 ntBASIC16.69■□□□□ 0.26
LRIT2A6NDA9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.69■□□□□ 0.26
LRIT2A6NDA9 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms