Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP17L4A6NCW7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC21.1■□□□□ 0.97
USP17L4A6NCW7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC21.1■□□□□ 0.97
USP17L4A6NCW7 ACTG1P14-201ENST00000446382 1122 ntBASIC21.1■□□□□ 0.97
USP17L4A6NCW7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP17L4A6NCW7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.1■□□□□ 0.97
USP17L4A6NCW7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC21.1■□□□□ 0.97
USP17L4A6NCW7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC21.1■□□□□ 0.97
USP17L4A6NCW7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC21.1■□□□□ 0.97
USP17L4A6NCW7 AC007064.4-201ENST00000637740 555 ntBASIC21.1■□□□□ 0.97
USP17L4A6NCW7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.1■□□□□ 0.97
USP17L4A6NCW7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP17L4A6NCW7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.1■□□□□ 0.97
USP17L4A6NCW7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP17L4A6NCW7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP17L4A6NCW7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP17L4A6NCW7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP17L4A6NCW7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC21.09■□□□□ 0.97
USP17L4A6NCW7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
USP17L4A6NCW7 AC023141.13-201ENST00000604991 943 ntBASIC21.09■□□□□ 0.97
USP17L4A6NCW7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP17L4A6NCW7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.09■□□□□ 0.97
USP17L4A6NCW7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP17L4A6NCW7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP17L4A6NCW7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.09■□□□□ 0.97
USP17L4A6NCW7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
USP17L4A6NCW7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.09■□□□□ 0.97
USP17L4A6NCW7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.09■□□□□ 0.97
USP17L4A6NCW7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
USP17L4A6NCW7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP17L4A6NCW7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.08■□□□□ 0.97
USP17L4A6NCW7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP17L4A6NCW7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
USP17L4A6NCW7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
USP17L4A6NCW7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
USP17L4A6NCW7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP17L4A6NCW7 MYCLP1-201ENST00000372451 1075 ntBASIC21.08■□□□□ 0.97
USP17L4A6NCW7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.08■□□□□ 0.97
USP17L4A6NCW7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP17L4A6NCW7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
USP17L4A6NCW7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP17L4A6NCW7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.08■□□□□ 0.97
USP17L4A6NCW7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.08■□□□□ 0.97
USP17L4A6NCW7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC21.08■□□□□ 0.97
USP17L4A6NCW7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.08■□□□□ 0.97
USP17L4A6NCW7 AC106028.4-201ENST00000614509 607 ntBASIC21.08■□□□□ 0.97
USP17L4A6NCW7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC21.08■□□□□ 0.97
USP17L4A6NCW7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
USP17L4A6NCW7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP17L4A6NCW7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
USP17L4A6NCW7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP17L4A6NCW7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP17L4A6NCW7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.08■□□□□ 0.96
USP17L4A6NCW7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 PI4KAP1-204ENST00000612579 1703 ntBASIC21.07■□□□□ 0.96
USP17L4A6NCW7 REXO1L9P-201ENST00000604264 2108 ntBASIC21.07■□□□□ 0.96
USP17L4A6NCW7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 AP000344.2-201ENST00000512987 629 ntBASIC21.07■□□□□ 0.96
USP17L4A6NCW7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP17L4A6NCW7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP17L4A6NCW7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP17L4A6NCW7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP17L4A6NCW7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
USP17L4A6NCW7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP17L4A6NCW7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP17L4A6NCW7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC21.06■□□□□ 0.96
USP17L4A6NCW7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.06■□□□□ 0.96
USP17L4A6NCW7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC21.06■□□□□ 0.96
USP17L4A6NCW7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
USP17L4A6NCW7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC21.06■□□□□ 0.96
USP17L4A6NCW7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC21.06■□□□□ 0.96
USP17L4A6NCW7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC21.06■□□□□ 0.96
USP17L4A6NCW7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms