Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC23.64■■□□□ 1.37
SBNO1A3KN83 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SBNO1A3KN83 BSG-215ENST00000618006 1329 ntTSL 2 BASIC23.64■■□□□ 1.37
SBNO1A3KN83 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
SBNO1A3KN83 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.37
SBNO1A3KN83 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC23.64■■□□□ 1.37
SBNO1A3KN83 VPS29-207ENST00000549970 818 ntTSL 3 BASIC23.64■■□□□ 1.37
SBNO1A3KN83 AC087641.1-201ENST00000557561 1021 ntBASIC23.64■■□□□ 1.37
SBNO1A3KN83 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
SBNO1A3KN83 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC23.63■■□□□ 1.37
SBNO1A3KN83 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SBNO1A3KN83 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
SBNO1A3KN83 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SBNO1A3KN83 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC23.63■■□□□ 1.37
SBNO1A3KN83 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SBNO1A3KN83 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SBNO1A3KN83 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SBNO1A3KN83 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC23.63■■□□□ 1.37
SBNO1A3KN83 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SBNO1A3KN83 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SBNO1A3KN83 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC23.63■■□□□ 1.37
SBNO1A3KN83 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC23.63■■□□□ 1.37
SBNO1A3KN83 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC23.63■■□□□ 1.37
SBNO1A3KN83 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC23.63■■□□□ 1.37
SBNO1A3KN83 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC23.63■■□□□ 1.37
SBNO1A3KN83 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC23.63■■□□□ 1.37
SBNO1A3KN83 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SBNO1A3KN83 AC009949.1-201ENST00000623048 1830 ntBASIC23.63■■□□□ 1.37
SBNO1A3KN83 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC23.63■■□□□ 1.37
SBNO1A3KN83 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC23.63■■□□□ 1.37
SBNO1A3KN83 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SBNO1A3KN83 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SBNO1A3KN83 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SBNO1A3KN83 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
SBNO1A3KN83 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SBNO1A3KN83 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SBNO1A3KN83 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SBNO1A3KN83 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC23.62■■□□□ 1.37
SBNO1A3KN83 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SBNO1A3KN83 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SBNO1A3KN83 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
SBNO1A3KN83 HNRNPFP1-201ENST00000391730 1133 ntBASIC23.62■■□□□ 1.37
SBNO1A3KN83 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC23.62■■□□□ 1.37
SBNO1A3KN83 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC23.62■■□□□ 1.37
SBNO1A3KN83 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC23.62■■□□□ 1.37
SBNO1A3KN83 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SBNO1A3KN83 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC23.62■■□□□ 1.37
SBNO1A3KN83 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC23.62■■□□□ 1.37
SBNO1A3KN83 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC23.62■■□□□ 1.37
SBNO1A3KN83 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC23.62■■□□□ 1.37
SBNO1A3KN83 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SBNO1A3KN83 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SBNO1A3KN83 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SBNO1A3KN83 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
SBNO1A3KN83 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC23.61■■□□□ 1.37
SBNO1A3KN83 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SBNO1A3KN83 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SBNO1A3KN83 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SBNO1A3KN83 MIR661-201ENST00000384842 89 ntBASIC23.61■■□□□ 1.37
SBNO1A3KN83 METTL26-204ENST00000397665 558 ntTSL 2 BASIC23.61■■□□□ 1.37
SBNO1A3KN83 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC23.61■■□□□ 1.37
SBNO1A3KN83 AC140658.5-201ENST00000438532 169 ntBASIC23.61■■□□□ 1.37
SBNO1A3KN83 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SBNO1A3KN83 FAM86C2P-203ENST00000528684 1004 ntBASIC23.61■■□□□ 1.37
SBNO1A3KN83 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC23.61■■□□□ 1.37
SBNO1A3KN83 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SBNO1A3KN83 YTHDF3-AS1-201ENST00000603538 718 ntBASIC23.61■■□□□ 1.37
SBNO1A3KN83 AC012645.4-201ENST00000610691 1061 ntBASIC23.61■■□□□ 1.37
SBNO1A3KN83 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SBNO1A3KN83 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.61■■□□□ 1.37
SBNO1A3KN83 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SBNO1A3KN83 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC23.61■■□□□ 1.37
SBNO1A3KN83 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
SBNO1A3KN83 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SBNO1A3KN83 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC23.6■■□□□ 1.37
SBNO1A3KN83 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SBNO1A3KN83 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SBNO1A3KN83 AL138781.2-201ENST00000617896 1843 ntBASIC23.6■■□□□ 1.37
SBNO1A3KN83 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SBNO1A3KN83 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
SBNO1A3KN83 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC23.6■■□□□ 1.37
SBNO1A3KN83 NABP1-203ENST00000409510 843 ntTSL 5 BASIC23.6■■□□□ 1.37
SBNO1A3KN83 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC23.6■■□□□ 1.37
SBNO1A3KN83 AC005034.1-201ENST00000426657 489 ntBASIC23.6■■□□□ 1.37
SBNO1A3KN83 AC055876.3-201ENST00000431496 288 ntBASIC23.6■■□□□ 1.37
SBNO1A3KN83 SLC25A6P2-201ENST00000497974 877 ntBASIC23.6■■□□□ 1.37
SBNO1A3KN83 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC23.6■■□□□ 1.37
SBNO1A3KN83 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SBNO1A3KN83 AC138649.4-201ENST00000612222 287 ntBASIC23.6■■□□□ 1.37
SBNO1A3KN83 AP001059.3-201ENST00000619053 235 ntBASIC23.6■■□□□ 1.37
SBNO1A3KN83 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SBNO1A3KN83 TNXA-203ENST00000507684 2038 ntBASIC23.6■■□□□ 1.37
SBNO1A3KN83 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC23.6■■□□□ 1.37
SBNO1A3KN83 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC23.6■■□□□ 1.37
SBNO1A3KN83 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SBNO1A3KN83 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SBNO1A3KN83 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC23.59■■□□□ 1.37
SBNO1A3KN83 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC23.59■■□□□ 1.37
SBNO1A3KN83 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC23.59■■□□□ 1.37
SBNO1A3KN83 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms