Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.29■□□□□ 0.84
SSC5DA1L4H1 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SSC5DA1L4H1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SSC5DA1L4H1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SSC5DA1L4H1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SSC5DA1L4H1 WIZP1-201ENST00000531444 2299 ntBASIC20.29■□□□□ 0.84
SSC5DA1L4H1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SSC5DA1L4H1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSC5DA1L4H1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.29■□□□□ 0.84
SSC5DA1L4H1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSC5DA1L4H1 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.29■□□□□ 0.84
SSC5DA1L4H1 AC002472.2-201ENST00000442739 958 ntBASIC20.29■□□□□ 0.84
SSC5DA1L4H1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SSC5DA1L4H1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.29■□□□□ 0.84
SSC5DA1L4H1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.29■□□□□ 0.84
SSC5DA1L4H1 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC20.29■□□□□ 0.84
SSC5DA1L4H1 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SSC5DA1L4H1 AC243562.1-201ENST00000560672 389 ntBASIC20.29■□□□□ 0.84
SSC5DA1L4H1 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.29■□□□□ 0.84
SSC5DA1L4H1 AP001059.3-201ENST00000619053 235 ntBASIC20.29■□□□□ 0.84
SSC5DA1L4H1 AL035252.4-201ENST00000624174 288 ntBASIC20.29■□□□□ 0.84
SSC5DA1L4H1 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.29■□□□□ 0.84
SSC5DA1L4H1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.29■□□□□ 0.84
SSC5DA1L4H1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SSC5DA1L4H1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
SSC5DA1L4H1 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.29■□□□□ 0.84
SSC5DA1L4H1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSC5DA1L4H1 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 REXO1L11P-201ENST00000620964 1927 ntBASIC20.28■□□□□ 0.84
SSC5DA1L4H1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 AC244107.1-201ENST00000442033 332 ntBASIC20.28■□□□□ 0.84
SSC5DA1L4H1 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 RN7SL589P-201ENST00000481268 310 ntBASIC20.28■□□□□ 0.84
SSC5DA1L4H1 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 POLD4-211ENST00000539074 714 ntTSL 3 BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 AC087641.1-201ENST00000557561 1021 ntBASIC20.28■□□□□ 0.84
SSC5DA1L4H1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 REXO1L9P-201ENST00000604264 2108 ntBASIC20.28■□□□□ 0.84
SSC5DA1L4H1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSC5DA1L4H1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSC5DA1L4H1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSC5DA1L4H1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SSC5DA1L4H1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSC5DA1L4H1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSC5DA1L4H1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SSC5DA1L4H1 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSC5DA1L4H1 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SSC5DA1L4H1 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSC5DA1L4H1 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSC5DA1L4H1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SSC5DA1L4H1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.27■□□□□ 0.84
SSC5DA1L4H1 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.27■□□□□ 0.84
SSC5DA1L4H1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.27■□□□□ 0.84
SSC5DA1L4H1 AL512356.2-201ENST00000546955 174 ntBASIC20.27■□□□□ 0.84
SSC5DA1L4H1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSC5DA1L4H1 AC012645.4-201ENST00000610691 1061 ntBASIC20.27■□□□□ 0.84
SSC5DA1L4H1 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SSC5DA1L4H1 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
SSC5DA1L4H1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SSC5DA1L4H1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.27■□□□□ 0.84
SSC5DA1L4H1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSC5DA1L4H1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.27■□□□□ 0.84
SSC5DA1L4H1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SSC5DA1L4H1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
SSC5DA1L4H1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.27■□□□□ 0.83
SSC5DA1L4H1 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.26■□□□□ 0.83
SSC5DA1L4H1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSC5DA1L4H1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSC5DA1L4H1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.26■□□□□ 0.83
SSC5DA1L4H1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.26■□□□□ 0.83
SSC5DA1L4H1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSC5DA1L4H1 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSC5DA1L4H1 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSC5DA1L4H1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSC5DA1L4H1 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC20.26■□□□□ 0.83
SSC5DA1L4H1 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.26■□□□□ 0.83
SSC5DA1L4H1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.26■□□□□ 0.83
SSC5DA1L4H1 AC055876.3-201ENST00000431496 288 ntBASIC20.26■□□□□ 0.83
SSC5DA1L4H1 AC005237.2-201ENST00000434368 219 ntBASIC20.26■□□□□ 0.83
SSC5DA1L4H1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms