Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DDX49Q9Y6V7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
DDX49Q9Y6V7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
DDX49Q9Y6V7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX49Q9Y6V7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
DDX49Q9Y6V7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX49Q9Y6V7 GMCL1P1-201ENST00000463439 1581 ntBASIC21.19■□□□□ 0.98
DDX49Q9Y6V7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
DDX49Q9Y6V7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX49Q9Y6V7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.18■□□□□ 0.98
DDX49Q9Y6V7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX49Q9Y6V7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21.18■□□□□ 0.98
DDX49Q9Y6V7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX49Q9Y6V7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.18■□□□□ 0.98
DDX49Q9Y6V7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX49Q9Y6V7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX49Q9Y6V7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
DDX49Q9Y6V7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.18■□□□□ 0.98
DDX49Q9Y6V7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.18■□□□□ 0.98
DDX49Q9Y6V7 AP002414.4-201ENST00000589764 1148 ntBASIC21.18■□□□□ 0.98
DDX49Q9Y6V7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
DDX49Q9Y6V7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX49Q9Y6V7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DDX49Q9Y6V7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
DDX49Q9Y6V7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX49Q9Y6V7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
DDX49Q9Y6V7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.18■□□□□ 0.98
DDX49Q9Y6V7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX49Q9Y6V7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX49Q9Y6V7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 BX276092.5-203ENST00000456199 560 ntBASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 AC010240.3-201ENST00000607688 395 ntBASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX49Q9Y6V7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 MIR662-201ENST00000384847 95 ntBASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 MIR564-202ENST00000385049 94 ntBASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX49Q9Y6V7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 AC246785.2-201ENST00000432512 513 ntBASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
DDX49Q9Y6V7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms