Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 AC090340.1-201ENST00000620778 4980 ntBASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 UPF3AP3-201ENST00000420996 769 ntBASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 DNAJB3-201ENST00000446806 729 ntBASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1G3Q9Y6M4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
CSNK1G3Q9Y6M4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.21■□□□□ 0.34
CSNK1G3Q9Y6M4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 AC003669.1-201ENST00000334569 611 ntBASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 AC004706.3-202ENST00000621574 984 ntBASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 AC004817.3-201ENST00000602957 2129 ntBASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CSNK1G3Q9Y6M4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 AL096828.2-201ENST00000567259 1965 ntBASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 SIGLEC30P-201ENST00000455569 941 ntBASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 AC132938.5-201ENST00000624980 1813 ntBASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CSNK1G3Q9Y6M4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.18■□□□□ 0.34
CSNK1G3Q9Y6M4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms