Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGC4Q9Y5F7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGC4Q9Y5F7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGC4Q9Y5F7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGC4Q9Y5F7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGC4Q9Y5F7 AKR1C7P-201ENST00000305623 895 ntBASIC17.77■□□□□ 0.44
PCDHGC4Q9Y5F7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
PCDHGC4Q9Y5F7 ABCD1P5-201ENST00000445663 754 ntBASIC17.77■□□□□ 0.44
PCDHGC4Q9Y5F7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGC4Q9Y5F7 EMBP1-201ENST00000458200 901 ntBASIC17.77■□□□□ 0.44
PCDHGC4Q9Y5F7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGC4Q9Y5F7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGC4Q9Y5F7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGC4Q9Y5F7 LINC01451-201ENST00000623792 534 ntBASIC17.77■□□□□ 0.44
PCDHGC4Q9Y5F7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGC4Q9Y5F7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGC4Q9Y5F7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGC4Q9Y5F7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGC4Q9Y5F7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.77■□□□□ 0.43
PCDHGC4Q9Y5F7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 AC005104.2-201ENST00000427818 678 ntBASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 RN7SL510P-201ENST00000581311 263 ntBASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 REXO1L6P-202ENST00000619970 1078 ntBASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 AD001527.2-201ENST00000622994 785 ntBASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC4Q9Y5F7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 AP005117.1-201ENST00000584346 1413 ntBASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 AP000867.4-201ENST00000641616 219 ntBASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 HLA-J-201ENST00000462773 1622 ntBASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 AL353593.2-201ENST00000602529 1483 ntBASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC4Q9Y5F7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 AC133963.1-201ENST00000504166 1679 ntBASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC4Q9Y5F7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms