Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGC3Q9UN70 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 AC046185.3-201ENST00000623228 1824 ntBASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 AC003669.1-201ENST00000334569 611 ntBASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 NUS1P2-201ENST00000417358 873 ntBASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 MIR3652-201ENST00000579335 131 ntBASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 AC073592.5-201ENST00000624854 528 ntBASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 AC009336.1-201ENST00000608941 1553 ntBASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGC3Q9UN70 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 AC138894.3-201ENST00000603787 634 ntBASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 AC116353.5-201ENST00000638148 1699 ntBASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGC3Q9UN70 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGC3Q9UN70 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGC3Q9UN70 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms