Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
VAPAQ9P0L0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
VAPAQ9P0L0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAPAQ9P0L0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.66■□□□□ 0.26
VAPAQ9P0L0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAPAQ9P0L0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VAPAQ9P0L0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 FLJ38576-201ENST00000623820 2459 ntBASIC16.65■□□□□ 0.26
VAPAQ9P0L0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPAQ9P0L0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
VAPAQ9P0L0 AC018695.7-201ENST00000624587 2492 ntBASIC16.64■□□□□ 0.26
VAPAQ9P0L0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 PCDHB19P-201ENST00000570871 2371 ntBASIC16.64■□□□□ 0.25
VAPAQ9P0L0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 AC046185.3-201ENST00000623228 1824 ntBASIC16.64■□□□□ 0.25
VAPAQ9P0L0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 HLA-F-220ENST00000434407 884 ntBASIC16.64■□□□□ 0.25
VAPAQ9P0L0 KRT18P48-201ENST00000434763 852 ntBASIC16.64■□□□□ 0.25
VAPAQ9P0L0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 KRT18P22-201ENST00000402024 1347 ntBASIC16.64■□□□□ 0.25
VAPAQ9P0L0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.64■□□□□ 0.25
VAPAQ9P0L0 AC005915.1-201ENST00000624912 2018 ntBASIC16.63■□□□□ 0.25
VAPAQ9P0L0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
VAPAQ9P0L0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.63■□□□□ 0.25
VAPAQ9P0L0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
VAPAQ9P0L0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAPAQ9P0L0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VAPAQ9P0L0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
VAPAQ9P0L0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
VAPAQ9P0L0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAPAQ9P0L0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAPAQ9P0L0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAPAQ9P0L0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAPAQ9P0L0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAPAQ9P0L0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms