Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.96■□□□□ 0.3
SPHK1Q9NYA1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SPHK1Q9NYA1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.96■□□□□ 0.3
SPHK1Q9NYA1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SPHK1Q9NYA1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 LINC00304-203ENST00000565008 1864 ntBASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 MRPL3P1-201ENST00000400109 1033 ntBASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 FAM197Y8-203ENST00000450145 560 ntBASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 AC002558.1-201ENST00000488906 803 ntBASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 NKAPP1-205ENST00000585790 367 ntBASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 AC004817.3-201ENST00000602957 2129 ntBASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
SPHK1Q9NYA1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 AL356309.3-201ENST00000624132 1934 ntBASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 BX005266.1-201ENST00000473402 457 ntBASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 IGHV3-52-201ENST00000519770 353 ntBASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 AC079776.2-201ENST00000641154 1609 ntBASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SPHK1Q9NYA1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 SPDYE21P-201ENST00000413323 827 ntBASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 FDX1P1-201ENST00000449115 551 ntBASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 STK25P1-201ENST00000585406 838 ntBASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 AC148477.8-201ENST00000624298 468 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms