Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 HYMAI-201ENST00000635591 3347 ntBASIC17.09■□□□□ 0.33
NDE1Q9NXR1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.09■□□□□ 0.33
NDE1Q9NXR1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 AC011506.1-201ENST00000474329 610 ntBASIC17.09■□□□□ 0.33
NDE1Q9NXR1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 FSCN1P1-201ENST00000568912 1481 ntBASIC17.09■□□□□ 0.33
NDE1Q9NXR1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 AC026691.1-201ENST00000602502 2017 ntBASIC17.09■□□□□ 0.33
NDE1Q9NXR1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDE1Q9NXR1 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
NDE1Q9NXR1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.08■□□□□ 0.33
NDE1Q9NXR1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.08■□□□□ 0.33
NDE1Q9NXR1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDE1Q9NXR1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.08■□□□□ 0.33
NDE1Q9NXR1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
NDE1Q9NXR1 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDE1Q9NXR1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDE1Q9NXR1 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDE1Q9NXR1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDE1Q9NXR1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 TSPY26P-202ENST00000565928 3884 ntBASIC17.08■□□□□ 0.32
NDE1Q9NXR1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDE1Q9NXR1 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 DDX43P3-201ENST00000441064 443 ntBASIC17.07■□□□□ 0.32
NDE1Q9NXR1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDE1Q9NXR1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms