Protein–RNA interactions for Protein: Q9NP64

ZCCHC17, Nucleolar protein of 40 kDa, humanhuman

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC17Q9NP64 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ZCCHC17Q9NP64 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.56■□□□□ 0.88
ZCCHC17Q9NP64 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.56■□□□□ 0.88
ZCCHC17Q9NP64 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZCCHC17Q9NP64 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZCCHC17Q9NP64 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ZCCHC17Q9NP64 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.56■□□□□ 0.88
ZCCHC17Q9NP64 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ZCCHC17Q9NP64 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZCCHC17Q9NP64 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZCCHC17Q9NP64 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZCCHC17Q9NP64 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZCCHC17Q9NP64 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZCCHC17Q9NP64 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 IGHV3-65-201ENST00000523210 341 ntBASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 AC008667.4-201ENST00000607370 168 ntBASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ZCCHC17Q9NP64 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.54■□□□□ 0.88
ZCCHC17Q9NP64 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.54■□□□□ 0.88
ZCCHC17Q9NP64 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZCCHC17Q9NP64 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZCCHC17Q9NP64 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZCCHC17Q9NP64 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.54■□□□□ 0.88
ZCCHC17Q9NP64 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ZCCHC17Q9NP64 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZCCHC17Q9NP64 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.54■□□□□ 0.88
ZCCHC17Q9NP64 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.54■□□□□ 0.88
ZCCHC17Q9NP64 AC108073.2-201ENST00000464002 357 ntBASIC20.54■□□□□ 0.88
ZCCHC17Q9NP64 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ZCCHC17Q9NP64 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.54■□□□□ 0.88
ZCCHC17Q9NP64 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.54■□□□□ 0.88
ZCCHC17Q9NP64 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.54■□□□□ 0.88
ZCCHC17Q9NP64 AL513190.1-201ENST00000621254 727 ntBASIC20.54■□□□□ 0.88
ZCCHC17Q9NP64 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.54■□□□□ 0.88
ZCCHC17Q9NP64 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZCCHC17Q9NP64 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ZCCHC17Q9NP64 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.54■□□□□ 0.88
ZCCHC17Q9NP64 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.54■□□□□ 0.88
ZCCHC17Q9NP64 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 ELK2BP-201ENST00000415014 1224 ntBASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 AL020989.1-201ENST00000422979 469 ntBASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 AC073592.5-201ENST00000624854 528 ntBASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 AC010460.3-201ENST00000511359 1579 ntBASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 AC004817.3-201ENST00000602957 2129 ntBASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZCCHC17Q9NP64 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZCCHC17Q9NP64 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZCCHC17Q9NP64 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms