Protein–RNA interactions for Protein: Q9H7V2

SYNDIG1, Synapse differentiation-inducing gene protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1Q9H7V2 MTDHP4-201ENST00000600287 670 ntBASIC17.22■□□□□ 0.35
SYNDIG1Q9H7V2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SYNDIG1Q9H7V2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNDIG1Q9H7V2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNDIG1Q9H7V2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SYNDIG1Q9H7V2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNDIG1Q9H7V2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNDIG1Q9H7V2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.22■□□□□ 0.35
SYNDIG1Q9H7V2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.22■□□□□ 0.35
SYNDIG1Q9H7V2 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNDIG1Q9H7V2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNDIG1Q9H7V2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.22■□□□□ 0.35
SYNDIG1Q9H7V2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNDIG1Q9H7V2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 AC140113.2-201ENST00000604370 208 ntBASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 AC025062.2-201ENST00000605477 670 ntBASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 AC027601.4-201ENST00000611259 610 ntBASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNDIG1Q9H7V2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 AC012640.2-201ENST00000561606 901 ntBASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 AL356488.2-201ENST00000602755 427 ntBASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SYNDIG1Q9H7V2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SYNDIG1Q9H7V2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.19■□□□□ 0.34
SYNDIG1Q9H7V2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SYNDIG1Q9H7V2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SYNDIG1Q9H7V2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SYNDIG1Q9H7V2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SYNDIG1Q9H7V2 AC009113.1-201ENST00000570267 2443 ntBASIC17.19■□□□□ 0.34
SYNDIG1Q9H7V2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SYNDIG1Q9H7V2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SYNDIG1Q9H7V2 BICD1-207ENST00000551848 1962 ntBASIC17.19■□□□□ 0.34
SYNDIG1Q9H7V2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SYNDIG1Q9H7V2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SYNDIG1Q9H7V2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SYNDIG1Q9H7V2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms