Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
ATP13A3Q9H7F0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP13A3Q9H7F0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP13A3Q9H7F0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP13A3Q9H7F0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
ATP13A3Q9H7F0 AC006116.8-202ENST00000587620 1550 ntBASIC17.82■□□□□ 0.44
ATP13A3Q9H7F0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP13A3Q9H7F0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP13A3Q9H7F0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP13A3Q9H7F0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP13A3Q9H7F0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ATP13A3Q9H7F0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP13A3Q9H7F0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 SIRPAP1-201ENST00000448467 1770 ntBASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 AC012317.2-201ENST00000623305 2251 ntBASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 RBM17P3-201ENST00000417687 1192 ntBASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 EMBP1-201ENST00000458200 901 ntBASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP13A3Q9H7F0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.8■□□□□ 0.44
ATP13A3Q9H7F0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.8■□□□□ 0.44
ATP13A3Q9H7F0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.8■□□□□ 0.44
ATP13A3Q9H7F0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.8■□□□□ 0.44
ATP13A3Q9H7F0 AKR1C7P-201ENST00000305623 895 ntBASIC17.8■□□□□ 0.44
ATP13A3Q9H7F0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP13A3Q9H7F0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.8■□□□□ 0.44
ATP13A3Q9H7F0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.8■□□□□ 0.44
ATP13A3Q9H7F0 AC106795.1-205ENST00000512851 1056 ntBASIC17.8■□□□□ 0.44
ATP13A3Q9H7F0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.8■□□□□ 0.44
ATP13A3Q9H7F0 AP001269.4-201ENST00000609611 512 ntBASIC17.8■□□□□ 0.44
ATP13A3Q9H7F0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.8■□□□□ 0.44
ATP13A3Q9H7F0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP13A3Q9H7F0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ATP13A3Q9H7F0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ATP13A3Q9H7F0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.8■□□□□ 0.44
ATP13A3Q9H7F0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.8■□□□□ 0.44
ATP13A3Q9H7F0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ATP13A3Q9H7F0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP13A3Q9H7F0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP13A3Q9H7F0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.8■□□□□ 0.44
ATP13A3Q9H7F0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP13A3Q9H7F0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 AC002558.1-201ENST00000488906 803 ntBASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 IGHV3-52-201ENST00000519770 353 ntBASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 AC008608.2-201ENST00000606089 416 ntBASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 AP005117.1-201ENST00000584346 1413 ntBASIC17.79■□□□□ 0.44
ATP13A3Q9H7F0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms