Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.74■□□□□ 0.11
SPENQ96T58 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SPENQ96T58 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SPENQ96T58 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.74■□□□□ 0.11
SPENQ96T58 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPENQ96T58 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SPENQ96T58 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SPENQ96T58 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPENQ96T58 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPENQ96T58 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPENQ96T58 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPENQ96T58 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SPENQ96T58 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPENQ96T58 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.73■□□□□ 0.11
SPENQ96T58 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPENQ96T58 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPENQ96T58 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SPENQ96T58 AC009113.1-201ENST00000570267 2443 ntBASIC15.73■□□□□ 0.11
SPENQ96T58 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPENQ96T58 AC015922.1-201ENST00000421102 1152 ntBASIC15.73■□□□□ 0.11
SPENQ96T58 AC074386.1-202ENST00000463561 864 ntBASIC15.73■□□□□ 0.11
SPENQ96T58 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.73■□□□□ 0.11
SPENQ96T58 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SPENQ96T58 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.73■□□□□ 0.11
SPENQ96T58 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPENQ96T58 AC012317.2-201ENST00000623305 2251 ntBASIC15.73■□□□□ 0.11
SPENQ96T58 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPENQ96T58 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPENQ96T58 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPENQ96T58 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPENQ96T58 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SPENQ96T58 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.73■□□□□ 0.11
SPENQ96T58 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC15.73■□□□□ 0.11
SPENQ96T58 AC069262.1-201ENST00000539058 672 ntBASIC15.73■□□□□ 0.11
SPENQ96T58 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPENQ96T58 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SPENQ96T58 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.72■□□□□ 0.11
SPENQ96T58 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SPENQ96T58 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPENQ96T58 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.72■□□□□ 0.11
SPENQ96T58 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.72■□□□□ 0.11
SPENQ96T58 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPENQ96T58 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPENQ96T58 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPENQ96T58 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPENQ96T58 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
SPENQ96T58 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SPENQ96T58 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPENQ96T58 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPENQ96T58 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.72■□□□□ 0.11
SPENQ96T58 STK25P1-201ENST00000585406 838 ntBASIC15.72■□□□□ 0.11
SPENQ96T58 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.72■□□□□ 0.11
SPENQ96T58 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.72■□□□□ 0.11
SPENQ96T58 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPENQ96T58 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.72■□□□□ 0.11
SPENQ96T58 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPENQ96T58 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPENQ96T58 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPENQ96T58 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.72■□□□□ 0.11
SPENQ96T58 FO538757.1-201ENST00000623083 1397 ntBASIC15.72■□□□□ 0.11
SPENQ96T58 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.72■□□□□ 0.11
SPENQ96T58 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPENQ96T58 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.72■□□□□ 0.11
SPENQ96T58 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.72■□□□□ 0.11
SPENQ96T58 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.72■□□□□ 0.11
SPENQ96T58 AC004835.2-201ENST00000603762 682 ntBASIC15.72■□□□□ 0.11
SPENQ96T58 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPENQ96T58 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.71■□□□□ 0.11
SPENQ96T58 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.71■□□□□ 0.11
SPENQ96T58 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.71■□□□□ 0.11
SPENQ96T58 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SPENQ96T58 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
SPENQ96T58 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SPENQ96T58 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.71■□□□□ 0.11
SPENQ96T58 AP005018.1-201ENST00000525475 301 ntBASIC15.71■□□□□ 0.11
SPENQ96T58 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.71■□□□□ 0.11
SPENQ96T58 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.71■□□□□ 0.11
SPENQ96T58 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.71■□□□□ 0.11
SPENQ96T58 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.71■□□□□ 0.11
SPENQ96T58 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.71■□□□□ 0.11
SPENQ96T58 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPENQ96T58 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPENQ96T58 AC097637.2-201ENST00000624096 1997 ntBASIC15.71■□□□□ 0.11
SPENQ96T58 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPENQ96T58 AC008677.1-201ENST00000519230 1561 ntBASIC15.71■□□□□ 0.11
SPENQ96T58 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
SPENQ96T58 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPENQ96T58 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPENQ96T58 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.71■□□□□ 0.11
SPENQ96T58 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SPENQ96T58 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.71■□□□□ 0.11
SPENQ96T58 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.71■□□□□ 0.11
SPENQ96T58 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SPENQ96T58 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SPENQ96T58 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPENQ96T58 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPENQ96T58 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SPENQ96T58 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
SPENQ96T58 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SPENQ96T58 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms