Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 AC129492.6-201ENST00000611383 1305 ntBASIC21.35■■□□□ 1.01
CRAMP1Q96RY5 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
CRAMP1Q96RY5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CRAMP1Q96RY5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CRAMP1Q96RY5 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CRAMP1Q96RY5 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CRAMP1Q96RY5 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CRAMP1Q96RY5 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CRAMP1Q96RY5 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CRAMP1Q96RY5 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC21.35■■□□□ 1.01
CRAMP1Q96RY5 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CRAMP1Q96RY5 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CRAMP1Q96RY5 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CRAMP1Q96RY5 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CRAMP1Q96RY5 LINC00628-201ENST00000628516 1289 ntBASIC21.35■■□□□ 1.01
CRAMP1Q96RY5 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CRAMP1Q96RY5 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
CRAMP1Q96RY5 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.35■■□□□ 1.01
CRAMP1Q96RY5 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CRAMP1Q96RY5 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CRAMP1Q96RY5 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.35■■□□□ 1.01
CRAMP1Q96RY5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CRAMP1Q96RY5 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.35■■□□□ 1.01
CRAMP1Q96RY5 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 CYP51A1P2-201ENST00000419457 1499 ntBASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 CD99-202ENST00000381180 530 ntTSL 2 BASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 AC002056.1-201ENST00000395613 760 ntBASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 AC093520.2-201ENST00000561830 333 ntBASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CRAMP1Q96RY5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 AC087163.2-201ENST00000457299 853 ntBASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 GATB-205ENST00000508611 605 ntTSL 2 BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 AC015911.4-201ENST00000588022 1070 ntBASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 AC046185.3-201ENST00000623228 1824 ntBASIC21.33■■□□□ 1.01
CRAMP1Q96RY5 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
CRAMP1Q96RY5 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.33■■□□□ 1
CRAMP1Q96RY5 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.33■■□□□ 1
CRAMP1Q96RY5 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
CRAMP1Q96RY5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1
CRAMP1Q96RY5 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
CRAMP1Q96RY5 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CRAMP1Q96RY5 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CRAMP1Q96RY5 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
CRAMP1Q96RY5 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CRAMP1Q96RY5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.32■■□□□ 1
CRAMP1Q96RY5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CRAMP1Q96RY5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CRAMP1Q96RY5 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.32■■□□□ 1
CRAMP1Q96RY5 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.32■■□□□ 1
CRAMP1Q96RY5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CRAMP1Q96RY5 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC21.32■■□□□ 1
CRAMP1Q96RY5 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CRAMP1Q96RY5 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC21.32■■□□□ 1
CRAMP1Q96RY5 LHX6-205ENST00000464484 666 ntTSL 2 BASIC21.32■■□□□ 1
CRAMP1Q96RY5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms