Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
BBS4Q96RK4 AC087388.1-201ENST00000571370 1112 ntBASIC16.72■□□□□ 0.27
BBS4Q96RK4 AC090616.6-201ENST00000582640 721 ntBASIC16.72■□□□□ 0.27
BBS4Q96RK4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.72■□□□□ 0.27
BBS4Q96RK4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.72■□□□□ 0.27
BBS4Q96RK4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BBS4Q96RK4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BBS4Q96RK4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.72■□□□□ 0.27
BBS4Q96RK4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
BBS4Q96RK4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BBS4Q96RK4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BBS4Q96RK4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.72■□□□□ 0.27
BBS4Q96RK4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BBS4Q96RK4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
BBS4Q96RK4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BBS4Q96RK4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
BBS4Q96RK4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BBS4Q96RK4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BBS4Q96RK4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
BBS4Q96RK4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
BBS4Q96RK4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BBS4Q96RK4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BBS4Q96RK4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
BBS4Q96RK4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BBS4Q96RK4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
BBS4Q96RK4 REXO1L11P-201ENST00000620964 1927 ntBASIC16.71■□□□□ 0.27
BBS4Q96RK4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BBS4Q96RK4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BBS4Q96RK4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BBS4Q96RK4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BBS4Q96RK4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.71■□□□□ 0.27
BBS4Q96RK4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BBS4Q96RK4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BBS4Q96RK4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.71■□□□□ 0.27
BBS4Q96RK4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.71■□□□□ 0.27
BBS4Q96RK4 KRT8P26-201ENST00000534154 1276 ntBASIC16.71■□□□□ 0.27
BBS4Q96RK4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.71■□□□□ 0.27
BBS4Q96RK4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.71■□□□□ 0.27
BBS4Q96RK4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
BBS4Q96RK4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BBS4Q96RK4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BBS4Q96RK4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
BBS4Q96RK4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BBS4Q96RK4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BBS4Q96RK4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BBS4Q96RK4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BBS4Q96RK4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
BBS4Q96RK4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BBS4Q96RK4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BBS4Q96RK4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BBS4Q96RK4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
BBS4Q96RK4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
BBS4Q96RK4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.26
BBS4Q96RK4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
BBS4Q96RK4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.7■□□□□ 0.26
BBS4Q96RK4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.7■□□□□ 0.26
BBS4Q96RK4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS4Q96RK4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.7■□□□□ 0.26
BBS4Q96RK4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS4Q96RK4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS4Q96RK4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BBS4Q96RK4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
BBS4Q96RK4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BBS4Q96RK4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS4Q96RK4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS4Q96RK4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BBS4Q96RK4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BBS4Q96RK4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS4Q96RK4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.7■□□□□ 0.26
BBS4Q96RK4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
BBS4Q96RK4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS4Q96RK4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS4Q96RK4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS4Q96RK4 BX276092.5-203ENST00000456199 560 ntBASIC16.7■□□□□ 0.26
BBS4Q96RK4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.7■□□□□ 0.26
BBS4Q96RK4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.7■□□□□ 0.26
BBS4Q96RK4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.7■□□□□ 0.26
BBS4Q96RK4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
BBS4Q96RK4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BBS4Q96RK4 AL592071.1-201ENST00000611956 408 ntBASIC16.7■□□□□ 0.26
BBS4Q96RK4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
BBS4Q96RK4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS4Q96RK4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS4Q96RK4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.7■□□□□ 0.26
BBS4Q96RK4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS4Q96RK4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS4Q96RK4 AC005332.1-201ENST00000577698 1310 ntBASIC16.7■□□□□ 0.26
BBS4Q96RK4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BBS4Q96RK4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.69■□□□□ 0.26
BBS4Q96RK4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.69■□□□□ 0.26
BBS4Q96RK4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BBS4Q96RK4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.69■□□□□ 0.26
BBS4Q96RK4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BBS4Q96RK4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BBS4Q96RK4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
BBS4Q96RK4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.69■□□□□ 0.26
BBS4Q96RK4 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.69■□□□□ 0.26
BBS4Q96RK4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.69■□□□□ 0.26
BBS4Q96RK4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BBS4Q96RK4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms