Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 AL773604.1-201ENST00000617417 272 ntBASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 AC080080.1-201ENST00000625121 2420 ntBASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPGRIP1Q96KN7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 FAM197Y8-203ENST00000450145 560 ntBASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 KRT18P41-201ENST00000518924 1277 ntBASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 AC124864.1-201ENST00000623408 392 ntBASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 AC006116.8-202ENST00000587620 1550 ntBASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPGRIP1Q96KN7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 KRT18P23-201ENST00000435622 1283 ntBASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 RNA5SP419-201ENST00000515908 135 ntBASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 AL096828.2-201ENST00000567259 1965 ntBASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPGRIP1Q96KN7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 AC084018.2-201ENST00000613093 2607 ntBASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 MIR940-201ENST00000401276 94 ntBASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.41■□□□□ 0.7
RPGRIP1Q96KN7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms