Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 AF228730.6-201ENST00000641497 218 ntBASIC17.68■□□□□ 0.42
SHDQ96IW2 AC084121.3-201ENST00000641716 218 ntBASIC17.68■□□□□ 0.42
SHDQ96IW2 AC105233.6-201ENST00000642093 218 ntBASIC17.68■□□□□ 0.42
SHDQ96IW2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHDQ96IW2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SHDQ96IW2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.68■□□□□ 0.42
SHDQ96IW2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHDQ96IW2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHDQ96IW2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHDQ96IW2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHDQ96IW2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHDQ96IW2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHDQ96IW2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHDQ96IW2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.67■□□□□ 0.42
SHDQ96IW2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHDQ96IW2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
SHDQ96IW2 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHDQ96IW2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.67■□□□□ 0.42
SHDQ96IW2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.67■□□□□ 0.42
SHDQ96IW2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHDQ96IW2 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.67■□□□□ 0.42
SHDQ96IW2 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.67■□□□□ 0.42
SHDQ96IW2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHDQ96IW2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.67■□□□□ 0.42
SHDQ96IW2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.67■□□□□ 0.42
SHDQ96IW2 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.67■□□□□ 0.42
SHDQ96IW2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHDQ96IW2 AL035252.4-201ENST00000624174 288 ntBASIC17.67■□□□□ 0.42
SHDQ96IW2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.67■□□□□ 0.42
SHDQ96IW2 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHDQ96IW2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHDQ96IW2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.67■□□□□ 0.42
SHDQ96IW2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHDQ96IW2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SHDQ96IW2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHDQ96IW2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHDQ96IW2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHDQ96IW2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SHDQ96IW2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHDQ96IW2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHDQ96IW2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHDQ96IW2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
SHDQ96IW2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHDQ96IW2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHDQ96IW2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.66■□□□□ 0.42
SHDQ96IW2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHDQ96IW2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHDQ96IW2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHDQ96IW2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHDQ96IW2 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHDQ96IW2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHDQ96IW2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHDQ96IW2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHDQ96IW2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.66■□□□□ 0.42
SHDQ96IW2 AL671277.1-201ENST00000429656 993 ntBASIC17.66■□□□□ 0.42
SHDQ96IW2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.66■□□□□ 0.42
SHDQ96IW2 SPDYE11-202ENST00000450699 704 ntBASIC17.66■□□□□ 0.42
SHDQ96IW2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.66■□□□□ 0.42
SHDQ96IW2 TERF1P3-201ENST00000505638 1227 ntBASIC17.66■□□□□ 0.42
SHDQ96IW2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SHDQ96IW2 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.66■□□□□ 0.42
SHDQ96IW2 SPDYE9P-201ENST00000570642 692 ntBASIC17.66■□□□□ 0.42
SHDQ96IW2 SPDYE10P-202ENST00000612005 668 ntBASIC17.66■□□□□ 0.42
SHDQ96IW2 SPDYE8P-202ENST00000612377 668 ntBASIC17.66■□□□□ 0.42
SHDQ96IW2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SHDQ96IW2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHDQ96IW2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SHDQ96IW2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHDQ96IW2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.66■□□□□ 0.42
SHDQ96IW2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.66■□□□□ 0.42
SHDQ96IW2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHDQ96IW2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHDQ96IW2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHDQ96IW2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHDQ96IW2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHDQ96IW2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHDQ96IW2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHDQ96IW2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.65■□□□□ 0.42
SHDQ96IW2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHDQ96IW2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHDQ96IW2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHDQ96IW2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHDQ96IW2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.65■□□□□ 0.42
SHDQ96IW2 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.65■□□□□ 0.42
SHDQ96IW2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SHDQ96IW2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.65■□□□□ 0.42
SHDQ96IW2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.65■□□□□ 0.42
SHDQ96IW2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.65■□□□□ 0.42
SHDQ96IW2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHDQ96IW2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHDQ96IW2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SHDQ96IW2 DUX4L27-201ENST00000554796 1261 ntBASIC17.65■□□□□ 0.42
SHDQ96IW2 AC087641.1-201ENST00000557561 1021 ntBASIC17.65■□□□□ 0.42
SHDQ96IW2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SHDQ96IW2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHDQ96IW2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHDQ96IW2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.65■□□□□ 0.42
SHDQ96IW2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHDQ96IW2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHDQ96IW2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms