Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.92■□□□□ 0.62
SEMA4DQ92854 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.92■□□□□ 0.62
SEMA4DQ92854 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.92■□□□□ 0.62
SEMA4DQ92854 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.92■□□□□ 0.62
SEMA4DQ92854 AD001527.2-201ENST00000622994 785 ntBASIC18.92■□□□□ 0.62
SEMA4DQ92854 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEMA4DQ92854 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
SEMA4DQ92854 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SEMA4DQ92854 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEMA4DQ92854 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SEMA4DQ92854 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEMA4DQ92854 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SEMA4DQ92854 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SEMA4DQ92854 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SEMA4DQ92854 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.91■□□□□ 0.62
SEMA4DQ92854 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.91■□□□□ 0.62
SEMA4DQ92854 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SEMA4DQ92854 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SEMA4DQ92854 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.91■□□□□ 0.62
SEMA4DQ92854 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SEMA4DQ92854 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
SEMA4DQ92854 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SEMA4DQ92854 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SEMA4DQ92854 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.91■□□□□ 0.62
SEMA4DQ92854 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.91■□□□□ 0.62
SEMA4DQ92854 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SEMA4DQ92854 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SEMA4DQ92854 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.91■□□□□ 0.62
SEMA4DQ92854 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SEMA4DQ92854 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.91■□□□□ 0.62
SEMA4DQ92854 AC106820.2-201ENST00000563775 3264 ntBASIC18.91■□□□□ 0.62
SEMA4DQ92854 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
SEMA4DQ92854 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.91■□□□□ 0.62
SEMA4DQ92854 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SEMA4DQ92854 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SEMA4DQ92854 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.91■□□□□ 0.62
SEMA4DQ92854 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.91■□□□□ 0.62
SEMA4DQ92854 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.91■□□□□ 0.62
SEMA4DQ92854 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.9■□□□□ 0.62
SEMA4DQ92854 AC132938.5-201ENST00000624980 1813 ntBASIC18.9■□□□□ 0.62
SEMA4DQ92854 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.9■□□□□ 0.62
SEMA4DQ92854 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEMA4DQ92854 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEMA4DQ92854 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SEMA4DQ92854 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEMA4DQ92854 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEMA4DQ92854 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.9■□□□□ 0.62
SEMA4DQ92854 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SEMA4DQ92854 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEMA4DQ92854 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEMA4DQ92854 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.9■□□□□ 0.62
SEMA4DQ92854 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEMA4DQ92854 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEMA4DQ92854 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.9■□□□□ 0.62
SEMA4DQ92854 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.9■□□□□ 0.62
SEMA4DQ92854 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEMA4DQ92854 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SEMA4DQ92854 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.9■□□□□ 0.62
SEMA4DQ92854 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.9■□□□□ 0.62
SEMA4DQ92854 MIR3652-201ENST00000579335 131 ntBASIC18.9■□□□□ 0.62
SEMA4DQ92854 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.9■□□□□ 0.62
SEMA4DQ92854 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SEMA4DQ92854 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.9■□□□□ 0.62
SEMA4DQ92854 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
SEMA4DQ92854 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEMA4DQ92854 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEMA4DQ92854 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.9■□□□□ 0.62
SEMA4DQ92854 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.9■□□□□ 0.62
SEMA4DQ92854 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEMA4DQ92854 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEMA4DQ92854 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SEMA4DQ92854 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SEMA4DQ92854 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.89■□□□□ 0.62
SEMA4DQ92854 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SEMA4DQ92854 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
SEMA4DQ92854 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SEMA4DQ92854 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SEMA4DQ92854 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA4DQ92854 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA4DQ92854 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SEMA4DQ92854 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA4DQ92854 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SEMA4DQ92854 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA4DQ92854 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SEMA4DQ92854 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA4DQ92854 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.89■□□□□ 0.61
SEMA4DQ92854 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.89■□□□□ 0.61
SEMA4DQ92854 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
SEMA4DQ92854 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA4DQ92854 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.89■□□□□ 0.61
SEMA4DQ92854 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.89■□□□□ 0.61
SEMA4DQ92854 IGHV3-52-201ENST00000519770 353 ntBASIC18.89■□□□□ 0.61
SEMA4DQ92854 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.89■□□□□ 0.61
SEMA4DQ92854 STK25P1-201ENST00000585406 838 ntBASIC18.89■□□□□ 0.61
SEMA4DQ92854 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.89■□□□□ 0.61
SEMA4DQ92854 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.89■□□□□ 0.61
SEMA4DQ92854 AC012313.10-201ENST00000623509 926 ntBASIC18.89■□□□□ 0.61
SEMA4DQ92854 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA4DQ92854 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.61
SEMA4DQ92854 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms