Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SNIP1Q8TAD8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 AL158211.5-201ENST00000623583 2518 ntBASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 RHOQP3-201ENST00000437982 621 ntBASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 AC074386.1-202ENST00000463561 864 ntBASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 LETM1P2-201ENST00000597330 2178 ntBASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNIP1Q8TAD8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 AC004461.1-201ENST00000412461 403 ntBASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 AC091812.2-201ENST00000619081 385 ntBASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SNIP1Q8TAD8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 AL353593.2-201ENST00000602529 1483 ntBASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 DDX43P3-201ENST00000441064 443 ntBASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 AJ011932.1-201ENST00000621707 465 ntBASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 AC105339.1-204ENST00000636249 355 ntBASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms