Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 PCED1CP-201ENST00000419887 785 ntBASIC16.5■□□□□ 0.23
NUP43Q8NFH3 AL845331.1-201ENST00000424978 1190 ntBASIC16.5■□□□□ 0.23
NUP43Q8NFH3 CHCHD2P8-201ENST00000429873 447 ntBASIC16.5■□□□□ 0.23
NUP43Q8NFH3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 AL353801.3-201ENST00000609898 542 ntBASIC16.5■□□□□ 0.23
NUP43Q8NFH3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 CROCCP2-202ENST00000412962 2773 ntBASIC16.5■□□□□ 0.23
NUP43Q8NFH3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 AC016734.2-201ENST00000624325 1377 ntBASIC16.5■□□□□ 0.23
NUP43Q8NFH3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUP43Q8NFH3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 SIRPAP1-201ENST00000448467 1770 ntBASIC16.49■□□□□ 0.23
NUP43Q8NFH3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 AC007967.3-201ENST00000434308 558 ntBASIC16.49■□□□□ 0.23
NUP43Q8NFH3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 AC125634.1-201ENST00000438758 1403 ntBASIC16.49■□□□□ 0.23
NUP43Q8NFH3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 AC005336.2-201ENST00000593183 939 ntBASIC16.49■□□□□ 0.23
NUP43Q8NFH3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NUP43Q8NFH3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 IER3-202ENST00000376377 1350 ntBASIC16.48■□□□□ 0.23
NUP43Q8NFH3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.48■□□□□ 0.23
NUP43Q8NFH3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
NUP43Q8NFH3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms