Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 AC002558.1-201ENST00000488906 803 ntBASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 AC104819.1-201ENST00000504587 486 ntBASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 AC010460.3-201ENST00000511359 1579 ntBASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 MIR3180-1-201ENST00000580374 94 ntBASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 MIR3180-3-201ENST00000584616 94 ntBASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SRFBP1Q8NEF9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 OR6D1P-203ENST00000641209 4860 ntBASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 POM121L3P-201ENST00000419331 1163 ntBASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 AC093458.2-201ENST00000623150 629 ntBASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 REXO1L11P-201ENST00000620964 1927 ntBASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SRFBP1Q8NEF9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 IGHV3-52-201ENST00000519770 353 ntBASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 AP000867.3-201ENST00000524675 377 ntBASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 AC011467.2-201ENST00000598425 242 ntBASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRFBP1Q8NEF9 NSUN5P1-202ENST00000421140 1535 ntBASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 NSUN5P2-203ENST00000457352 1529 ntBASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms