Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CPEB3Q8NE35 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPEB3Q8NE35 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CPEB3Q8NE35 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CPEB3Q8NE35 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPEB3Q8NE35 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPEB3Q8NE35 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CPEB3Q8NE35 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CPEB3Q8NE35 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPEB3Q8NE35 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CPEB3Q8NE35 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CPEB3Q8NE35 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 BX276092.7-203ENST00000637198 1536 ntBASIC15.43■□□□□ 0.06
CPEB3Q8NE35 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 IGHV3-47-201ENST00000425060 335 ntBASIC15.43■□□□□ 0.06
CPEB3Q8NE35 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CPEB3Q8NE35 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 LINC00304-203ENST00000565008 1864 ntBASIC15.42■□□□□ 0.06
CPEB3Q8NE35 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 COX5BP2-201ENST00000392354 334 ntBASIC15.42■□□□□ 0.06
CPEB3Q8NE35 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 AC074051.2-201ENST00000565115 352 ntBASIC15.42■□□□□ 0.06
CPEB3Q8NE35 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 NSUN5P1-202ENST00000421140 1535 ntBASIC15.42■□□□□ 0.06
CPEB3Q8NE35 NSUN5P2-203ENST00000457352 1529 ntBASIC15.42■□□□□ 0.06
CPEB3Q8NE35 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CPEB3Q8NE35 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms