Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 KRT18P27-201ENST00000427733 1299 ntBASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 AC136632.2-201ENST00000512891 861 ntBASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 AP002472.1-201ENST00000577490 586 ntBASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 AC011467.4-201ENST00000594891 528 ntBASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 AC079776.2-201ENST00000641154 1609 ntBASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF248Q8NDW4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 CNN2P11-201ENST00000429351 262 ntBASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 BX005266.1-201ENST00000473402 457 ntBASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ZNF248Q8NDW4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 AC090164.3-201ENST00000610780 2143 ntBASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 SDHAP2-201ENST00000455183 2001 ntBASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 AC112698.1-201ENST00000510299 916 ntBASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 C20orf181-201ENST00000623918 480 ntBASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.81■□□□□ 0.28
ZNF248Q8NDW4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF248Q8NDW4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms