Protein–RNA interactions for Protein: Q8NBP7

PCSK9, Proprotein convertase subtilisin/kexin type 9, humanhuman

Known RBP Predictions only

Length 692 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9Q8NBP7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCSK9Q8NBP7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.31■□□□□ 0.68
PCSK9Q8NBP7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.31■□□□□ 0.68
PCSK9Q8NBP7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.31■□□□□ 0.68
PCSK9Q8NBP7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.31■□□□□ 0.68
PCSK9Q8NBP7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PCSK9Q8NBP7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.31■□□□□ 0.68
PCSK9Q8NBP7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
PCSK9Q8NBP7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.31■□□□□ 0.68
PCSK9Q8NBP7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.31■□□□□ 0.68
PCSK9Q8NBP7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.31■□□□□ 0.68
PCSK9Q8NBP7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.31■□□□□ 0.68
PCSK9Q8NBP7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCSK9Q8NBP7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.31■□□□□ 0.68
PCSK9Q8NBP7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.31■□□□□ 0.68
PCSK9Q8NBP7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCSK9Q8NBP7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCSK9Q8NBP7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCSK9Q8NBP7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCSK9Q8NBP7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCSK9Q8NBP7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
PCSK9Q8NBP7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCSK9Q8NBP7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.31■□□□□ 0.68
PCSK9Q8NBP7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCSK9Q8NBP7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCSK9Q8NBP7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.3■□□□□ 0.68
PCSK9Q8NBP7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.3■□□□□ 0.68
PCSK9Q8NBP7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCSK9Q8NBP7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.3■□□□□ 0.68
PCSK9Q8NBP7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCSK9Q8NBP7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PCSK9Q8NBP7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
PCSK9Q8NBP7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.3■□□□□ 0.68
PCSK9Q8NBP7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.3■□□□□ 0.68
PCSK9Q8NBP7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.3■□□□□ 0.68
PCSK9Q8NBP7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.3■□□□□ 0.68
PCSK9Q8NBP7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PCSK9Q8NBP7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.3■□□□□ 0.68
PCSK9Q8NBP7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.3■□□□□ 0.68
PCSK9Q8NBP7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCSK9Q8NBP7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCSK9Q8NBP7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCSK9Q8NBP7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCSK9Q8NBP7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCSK9Q8NBP7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 AC006116.8-202ENST00000587620 1550 ntBASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 PAWRP1-201ENST00000451083 565 ntBASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 COX20P2-201ENST00000452636 358 ntBASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 LINC00628-201ENST00000628516 1289 ntBASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.29■□□□□ 0.68
PCSK9Q8NBP7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 AC002056.1-201ENST00000395613 760 ntBASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 FAM86GP-201ENST00000448322 971 ntBASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCSK9Q8NBP7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCSK9Q8NBP7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms