Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 COX5BP2-201ENST00000392354 334 ntBASIC17.02■□□□□ 0.32
KRT78Q8N1N4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT78Q8N1N4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.02■□□□□ 0.32
KRT78Q8N1N4 DRAXINP1-201ENST00000437611 948 ntBASIC17.02■□□□□ 0.32
KRT78Q8N1N4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT78Q8N1N4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT78Q8N1N4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.02■□□□□ 0.32
KRT78Q8N1N4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
KRT78Q8N1N4 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.02■□□□□ 0.32
KRT78Q8N1N4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
KRT78Q8N1N4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.02■□□□□ 0.32
KRT78Q8N1N4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.02■□□□□ 0.32
KRT78Q8N1N4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT78Q8N1N4 AC125634.1-201ENST00000438758 1403 ntBASIC17.02■□□□□ 0.31
KRT78Q8N1N4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
KRT78Q8N1N4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT78Q8N1N4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT78Q8N1N4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
KRT78Q8N1N4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.02■□□□□ 0.31
KRT78Q8N1N4 REXO1L11P-201ENST00000620964 1927 ntBASIC17.02■□□□□ 0.31
KRT78Q8N1N4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 AL845331.1-201ENST00000424978 1190 ntBASIC17.01■□□□□ 0.31
KRT78Q8N1N4 AP002414.4-201ENST00000589764 1148 ntBASIC17.01■□□□□ 0.31
KRT78Q8N1N4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 AL138831.2-201ENST00000606564 490 ntBASIC17.01■□□□□ 0.31
KRT78Q8N1N4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT78Q8N1N4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17■□□□□ 0.31
KRT78Q8N1N4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
KRT78Q8N1N4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
KRT78Q8N1N4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
KRT78Q8N1N4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
KRT78Q8N1N4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
KRT78Q8N1N4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
KRT78Q8N1N4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 AC005104.2-201ENST00000427818 678 ntBASIC17■□□□□ 0.31
KRT78Q8N1N4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
KRT78Q8N1N4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17■□□□□ 0.31
KRT78Q8N1N4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17■□□□□ 0.31
KRT78Q8N1N4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17■□□□□ 0.31
KRT78Q8N1N4 AC009533.2-201ENST00000543664 586 ntBASIC17■□□□□ 0.31
KRT78Q8N1N4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17■□□□□ 0.31
KRT78Q8N1N4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
KRT78Q8N1N4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17■□□□□ 0.31
KRT78Q8N1N4 AC005336.2-201ENST00000593183 939 ntBASIC17■□□□□ 0.31
KRT78Q8N1N4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
KRT78Q8N1N4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17■□□□□ 0.31
KRT78Q8N1N4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms