Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC116Q8IYX3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC116Q8IYX3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC116Q8IYX3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CCDC116Q8IYX3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC116Q8IYX3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 AC125634.1-201ENST00000438758 1403 ntBASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 AC091607.1-201ENST00000490318 1060 ntBASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 AC005336.2-201ENST00000593183 939 ntBASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CCDC116Q8IYX3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 COX5BP2-201ENST00000392354 334 ntBASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 AC007967.3-201ENST00000434308 558 ntBASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 AP002383.4-201ENST00000442518 975 ntBASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 AP002414.4-201ENST00000589764 1148 ntBASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC116Q8IYX3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CCDC116Q8IYX3 AC246785.2-201ENST00000432512 513 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms