Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
APLFQ8IW19 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
APLFQ8IW19 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.51■□□□□ 0.39
APLFQ8IW19 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.51■□□□□ 0.39
APLFQ8IW19 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APLFQ8IW19 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
APLFQ8IW19 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
APLFQ8IW19 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APLFQ8IW19 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.51■□□□□ 0.39
APLFQ8IW19 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
APLFQ8IW19 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
APLFQ8IW19 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APLFQ8IW19 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.51■□□□□ 0.39
APLFQ8IW19 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.51■□□□□ 0.39
APLFQ8IW19 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.51■□□□□ 0.39
APLFQ8IW19 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.51■□□□□ 0.39
APLFQ8IW19 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APLFQ8IW19 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
APLFQ8IW19 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
APLFQ8IW19 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
APLFQ8IW19 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
APLFQ8IW19 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.51■□□□□ 0.39
APLFQ8IW19 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APLFQ8IW19 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
APLFQ8IW19 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
APLFQ8IW19 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.51■□□□□ 0.39
APLFQ8IW19 TSPY23P-201ENST00000440136 739 ntBASIC17.51■□□□□ 0.39
APLFQ8IW19 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
APLFQ8IW19 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.51■□□□□ 0.39
APLFQ8IW19 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.51■□□□□ 0.39
APLFQ8IW19 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
APLFQ8IW19 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.51■□□□□ 0.39
APLFQ8IW19 MIR3652-201ENST00000579335 131 ntBASIC17.51■□□□□ 0.39
APLFQ8IW19 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
APLFQ8IW19 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
APLFQ8IW19 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APLFQ8IW19 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
APLFQ8IW19 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APLFQ8IW19 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.51■□□□□ 0.39
APLFQ8IW19 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.51■□□□□ 0.39
APLFQ8IW19 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
APLFQ8IW19 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
APLFQ8IW19 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
APLFQ8IW19 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
APLFQ8IW19 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
APLFQ8IW19 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APLFQ8IW19 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APLFQ8IW19 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.5■□□□□ 0.39
APLFQ8IW19 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.5■□□□□ 0.39
APLFQ8IW19 FEM1AP3-201ENST00000403722 1741 ntBASIC17.5■□□□□ 0.39
APLFQ8IW19 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APLFQ8IW19 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APLFQ8IW19 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
APLFQ8IW19 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.5■□□□□ 0.39
APLFQ8IW19 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APLFQ8IW19 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
APLFQ8IW19 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
APLFQ8IW19 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APLFQ8IW19 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APLFQ8IW19 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.5■□□□□ 0.39
APLFQ8IW19 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APLFQ8IW19 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.5■□□□□ 0.39
APLFQ8IW19 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.5■□□□□ 0.39
APLFQ8IW19 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.5■□□□□ 0.39
APLFQ8IW19 AC092597.1-201ENST00000487352 616 ntBASIC17.5■□□□□ 0.39
APLFQ8IW19 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.5■□□□□ 0.39
APLFQ8IW19 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.5■□□□□ 0.39
APLFQ8IW19 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
APLFQ8IW19 AC011498.5-201ENST00000592027 486 ntBASIC17.5■□□□□ 0.39
APLFQ8IW19 AC092329.2-201ENST00000598402 547 ntBASIC17.5■□□□□ 0.39
APLFQ8IW19 AL121672.3-201ENST00000608644 468 ntBASIC17.5■□□□□ 0.39
APLFQ8IW19 AC092119.3-201ENST00000612618 583 ntBASIC17.5■□□□□ 0.39
APLFQ8IW19 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
APLFQ8IW19 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
APLFQ8IW19 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.5■□□□□ 0.39
APLFQ8IW19 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APLFQ8IW19 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.5■□□□□ 0.39
APLFQ8IW19 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APLFQ8IW19 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
APLFQ8IW19 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APLFQ8IW19 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
APLFQ8IW19 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APLFQ8IW19 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APLFQ8IW19 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
APLFQ8IW19 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APLFQ8IW19 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.5■□□□□ 0.39
APLFQ8IW19 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
APLFQ8IW19 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APLFQ8IW19 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
APLFQ8IW19 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
APLFQ8IW19 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
APLFQ8IW19 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APLFQ8IW19 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
APLFQ8IW19 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
APLFQ8IW19 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.49■□□□□ 0.39
APLFQ8IW19 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
APLFQ8IW19 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
APLFQ8IW19 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
APLFQ8IW19 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
APLFQ8IW19 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms