Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL3Q8IVW4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CDKL3Q8IVW4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL3Q8IVW4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 AC016396.2-201ENST00000562575 1417 ntBASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 AC011498.5-201ENST00000592027 486 ntBASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 AL139327.4-201ENST00000612362 153 ntBASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 PRORSD1P-202ENST00000563365 2154 ntBASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL3Q8IVW4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 RN7SL606P-201ENST00000472779 293 ntBASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 AC090616.6-201ENST00000582640 721 ntBASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL3Q8IVW4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CDKL3Q8IVW4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDKL3Q8IVW4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CDKL3Q8IVW4 AP001094.4-201ENST00000579008 2176 ntBASIC18.08■□□□□ 0.49
CDKL3Q8IVW4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDKL3Q8IVW4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDKL3Q8IVW4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.08■□□□□ 0.48
CDKL3Q8IVW4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CDKL3Q8IVW4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDKL3Q8IVW4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.08■□□□□ 0.48
CDKL3Q8IVW4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDKL3Q8IVW4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDKL3Q8IVW4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.08■□□□□ 0.48
CDKL3Q8IVW4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.08■□□□□ 0.48
CDKL3Q8IVW4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.08■□□□□ 0.48
CDKL3Q8IVW4 AC124864.1-201ENST00000623408 392 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms