Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 AC011840.4-201ENST00000578471 627 ntBASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 NTF6B-201ENST00000591913 560 ntBASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.73■■□□□ 1.07
CHD1LQ86WJ1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHD1LQ86WJ1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHD1LQ86WJ1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHD1LQ86WJ1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHD1LQ86WJ1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHD1LQ86WJ1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.73■■□□□ 1.07
CHD1LQ86WJ1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHD1LQ86WJ1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHD1LQ86WJ1 AC091607.1-201ENST00000490318 1060 ntBASIC21.73■■□□□ 1.07
CHD1LQ86WJ1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.73■■□□□ 1.07
CHD1LQ86WJ1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.73■■□□□ 1.07
CHD1LQ86WJ1 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.73■■□□□ 1.07
CHD1LQ86WJ1 AL049597.2-201ENST00000565575 961 ntBASIC21.73■■□□□ 1.07
CHD1LQ86WJ1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.73■■□□□ 1.07
CHD1LQ86WJ1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.73■■□□□ 1.07
CHD1LQ86WJ1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHD1LQ86WJ1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.73■■□□□ 1.07
CHD1LQ86WJ1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHD1LQ86WJ1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.73■■□□□ 1.07
CHD1LQ86WJ1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.73■■□□□ 1.07
CHD1LQ86WJ1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHD1LQ86WJ1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHD1LQ86WJ1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.72■■□□□ 1.07
CHD1LQ86WJ1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHD1LQ86WJ1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHD1LQ86WJ1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHD1LQ86WJ1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHD1LQ86WJ1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.72■■□□□ 1.07
CHD1LQ86WJ1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.72■■□□□ 1.07
CHD1LQ86WJ1 AC109462.3-201ENST00000573934 613 ntBASIC21.72■■□□□ 1.07
CHD1LQ86WJ1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHD1LQ86WJ1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CHD1LQ86WJ1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC21.72■■□□□ 1.07
CHD1LQ86WJ1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.72■■□□□ 1.07
CHD1LQ86WJ1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHD1LQ86WJ1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHD1LQ86WJ1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.72■■□□□ 1.07
CHD1LQ86WJ1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHD1LQ86WJ1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHD1LQ86WJ1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHD1LQ86WJ1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHD1LQ86WJ1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHD1LQ86WJ1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 AL049757.1-201ENST00000616842 1596 ntBASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 SLC25A1P3-201ENST00000395415 828 ntBASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 AC122714.2-201ENST00000502787 707 ntBASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 AC016734.2-201ENST00000624325 1377 ntBASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CHD1LQ86WJ1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.7■■□□□ 1.07
CHD1LQ86WJ1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.7■■□□□ 1.07
CHD1LQ86WJ1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHD1LQ86WJ1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms