Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 AC024563.2-201ENST00000603282 481 ntBASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 AC145285.6-201ENST00000604632 637 ntBASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
MRPL55Q7Z7F7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 LINC00167-201ENST00000530583 1419 ntBASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 MIR600HG-201ENST00000449175 5984 ntBASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 AC100803.2-201ENST00000562459 1963 ntBASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 ANKRD20A18P-201ENST00000359341 492 ntBASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 AL596275.1-201ENST00000423464 877 ntBASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 GCSHP2-201ENST00000560971 527 ntBASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 CEP83-AS1-201ENST00000623122 2482 ntBASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 KRT89P-201ENST00000620027 1478 ntBASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC11.36□□□□□ -0.59
MRPL55Q7Z7F7 AL355312.1-201ENST00000407115 2176 ntBASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms