Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.95■□□□□ 0.14
SHFQ7M4L6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHFQ7M4L6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.95■□□□□ 0.14
SHFQ7M4L6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHFQ7M4L6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SHFQ7M4L6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.95■□□□□ 0.14
SHFQ7M4L6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SHFQ7M4L6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHFQ7M4L6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SHFQ7M4L6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.95■□□□□ 0.14
SHFQ7M4L6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHFQ7M4L6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
SHFQ7M4L6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.95■□□□□ 0.14
SHFQ7M4L6 MIR3917-201ENST00000580971 93 ntBASIC15.95■□□□□ 0.14
SHFQ7M4L6 MIR4497-201ENST00000583208 89 ntBASIC15.95■□□□□ 0.14
SHFQ7M4L6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SHFQ7M4L6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
SHFQ7M4L6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHFQ7M4L6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHFQ7M4L6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.95■□□□□ 0.14
SHFQ7M4L6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHFQ7M4L6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHFQ7M4L6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHFQ7M4L6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SHFQ7M4L6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHFQ7M4L6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SHFQ7M4L6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.95■□□□□ 0.14
SHFQ7M4L6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SHFQ7M4L6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.95■□□□□ 0.14
SHFQ7M4L6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SHFQ7M4L6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SHFQ7M4L6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHFQ7M4L6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
SHFQ7M4L6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHFQ7M4L6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.95■□□□□ 0.14
SHFQ7M4L6 PCDHA14-201ENST00000506751 2298 ntBASIC15.94■□□□□ 0.14
SHFQ7M4L6 PCDHB19P-201ENST00000570871 2371 ntBASIC15.94■□□□□ 0.14
SHFQ7M4L6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHFQ7M4L6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.94■□□□□ 0.14
SHFQ7M4L6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHFQ7M4L6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.94■□□□□ 0.14
SHFQ7M4L6 AC060834.1-201ENST00000443027 2032 ntBASIC15.94■□□□□ 0.14
SHFQ7M4L6 AGGF1P2-201ENST00000426656 2106 ntBASIC15.94■□□□□ 0.14
SHFQ7M4L6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHFQ7M4L6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SHFQ7M4L6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SHFQ7M4L6 MMP23A-201ENST00000234610 1017 ntBASIC15.94■□□□□ 0.14
SHFQ7M4L6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SHFQ7M4L6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.94■□□□□ 0.14
SHFQ7M4L6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.94■□□□□ 0.14
SHFQ7M4L6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.94■□□□□ 0.14
SHFQ7M4L6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.94■□□□□ 0.14
SHFQ7M4L6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SHFQ7M4L6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SHFQ7M4L6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.94■□□□□ 0.14
SHFQ7M4L6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHFQ7M4L6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.94■□□□□ 0.14
SHFQ7M4L6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHFQ7M4L6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHFQ7M4L6 PCDH8P1-201ENST00000428983 2773 ntBASIC15.94■□□□□ 0.14
SHFQ7M4L6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SHFQ7M4L6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHFQ7M4L6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SHFQ7M4L6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.94■□□□□ 0.14
SHFQ7M4L6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SHFQ7M4L6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SHFQ7M4L6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
SHFQ7M4L6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SHFQ7M4L6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.93■□□□□ 0.14
SHFQ7M4L6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.93■□□□□ 0.14
SHFQ7M4L6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
SHFQ7M4L6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SHFQ7M4L6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHFQ7M4L6 CYP2D8P-201ENST00000433633 1490 ntBASIC15.93■□□□□ 0.14
SHFQ7M4L6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHFQ7M4L6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHFQ7M4L6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.93■□□□□ 0.14
SHFQ7M4L6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHFQ7M4L6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.93■□□□□ 0.14
SHFQ7M4L6 INGX-201ENST00000359239 846 ntBASIC15.93■□□□□ 0.14
SHFQ7M4L6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
SHFQ7M4L6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SHFQ7M4L6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.93■□□□□ 0.14
SHFQ7M4L6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.93■□□□□ 0.14
SHFQ7M4L6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHFQ7M4L6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.93■□□□□ 0.14
SHFQ7M4L6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
SHFQ7M4L6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.93■□□□□ 0.14
SHFQ7M4L6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SHFQ7M4L6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHFQ7M4L6 AC010947.1-201ENST00000623454 693 ntBASIC15.93■□□□□ 0.14
SHFQ7M4L6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.93■□□□□ 0.14
SHFQ7M4L6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHFQ7M4L6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHFQ7M4L6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHFQ7M4L6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHFQ7M4L6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHFQ7M4L6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHFQ7M4L6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.93■□□□□ 0.14
SHFQ7M4L6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms