Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CHMP1BQ7LBR1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP1BQ7LBR1 AL024508.2-201ENST00000607749 1894 ntBASIC16.27■□□□□ 0.2
CHMP1BQ7LBR1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CHMP1BQ7LBR1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.27■□□□□ 0.2
CHMP1BQ7LBR1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP1BQ7LBR1 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP1BQ7LBR1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CHMP1BQ7LBR1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CHMP1BQ7LBR1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP1BQ7LBR1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP1BQ7LBR1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.27■□□□□ 0.2
CHMP1BQ7LBR1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP1BQ7LBR1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.27■□□□□ 0.2
CHMP1BQ7LBR1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.27■□□□□ 0.2
CHMP1BQ7LBR1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.27■□□□□ 0.2
CHMP1BQ7LBR1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.27■□□□□ 0.2
CHMP1BQ7LBR1 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.27■□□□□ 0.2
CHMP1BQ7LBR1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CHMP1BQ7LBR1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.27■□□□□ 0.2
CHMP1BQ7LBR1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP1BQ7LBR1 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.27■□□□□ 0.2
CHMP1BQ7LBR1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHMP1BQ7LBR1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP1BQ7LBR1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.27■□□□□ 0.19
CHMP1BQ7LBR1 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP1BQ7LBR1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP1BQ7LBR1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP1BQ7LBR1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP1BQ7LBR1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP1BQ7LBR1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
CHMP1BQ7LBR1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP1BQ7LBR1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP1BQ7LBR1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.27■□□□□ 0.19
CHMP1BQ7LBR1 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.27■□□□□ 0.19
CHMP1BQ7LBR1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP1BQ7LBR1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHMP1BQ7LBR1 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 DRAXINP1-201ENST00000437611 948 ntBASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 AP002383.4-201ENST00000442518 975 ntBASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 TOB2P1-201ENST00000469761 992 ntBASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 AC104819.1-201ENST00000504587 486 ntBASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 LINC01711-201ENST00000598340 967 ntBASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 AL592071.1-201ENST00000611956 408 ntBASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHMP1BQ7LBR1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.25■□□□□ 0.19
CHMP1BQ7LBR1 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
CHMP1BQ7LBR1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.25■□□□□ 0.19
CHMP1BQ7LBR1 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CHMP1BQ7LBR1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHMP1BQ7LBR1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms