Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXR1Q6PIV2 LINC01126-201ENST00000623515 1646 ntBASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 HOMER2P1-201ENST00000455653 964 ntBASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 FAM86EP-206ENST00000510506 987 ntBASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 AL441883.1-201ENST00000566170 1045 ntBASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 AL023803.3-201ENST00000615559 522 ntBASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 AL121956.5-201ENST00000625261 221 ntBASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
FOXR1Q6PIV2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 TPM4P1-201ENST00000436100 807 ntBASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 AP003041.3-201ENST00000527151 707 ntBASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
FOXR1Q6PIV2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 AL096828.2-201ENST00000567259 1965 ntBASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
FOXR1Q6PIV2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms