Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
FAM27BQ5VT28 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.43■□□□□ 0.06
FAM27BQ5VT28 AC016396.2-201ENST00000562575 1417 ntBASIC15.43■□□□□ 0.06
FAM27BQ5VT28 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 AC139713.2-201ENST00000641328 2723 ntBASIC15.42■□□□□ 0.06
FAM27BQ5VT28 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 POM121L3P-201ENST00000419331 1163 ntBASIC15.42■□□□□ 0.06
FAM27BQ5VT28 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 AP000867.3-201ENST00000524675 377 ntBASIC15.42■□□□□ 0.06
FAM27BQ5VT28 AC074051.2-201ENST00000565115 352 ntBASIC15.42■□□□□ 0.06
FAM27BQ5VT28 AC111152.3-201ENST00000569699 673 ntBASIC15.42■□□□□ 0.06
FAM27BQ5VT28 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.42■□□□□ 0.06
FAM27BQ5VT28 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 AL645608.8-201ENST00000606034 2086 ntBASIC15.42■□□□□ 0.06
FAM27BQ5VT28 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
FAM27BQ5VT28 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 BNIP3P18-201ENST00000593976 575 ntBASIC15.41■□□□□ 0.06
FAM27BQ5VT28 AC092119.3-201ENST00000612618 583 ntBASIC15.41■□□□□ 0.06
FAM27BQ5VT28 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 CROCCP2-202ENST00000412962 2773 ntBASIC15.41■□□□□ 0.06
FAM27BQ5VT28 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FAM27BQ5VT28 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM27BQ5VT28 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM27BQ5VT28 AL353593.2-201ENST00000602529 1483 ntBASIC15.4■□□□□ 0.06
FAM27BQ5VT28 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.4■□□□□ 0.06
FAM27BQ5VT28 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
FAM27BQ5VT28 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FAM27BQ5VT28 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM27BQ5VT28 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM27BQ5VT28 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.4■□□□□ 0.06
FAM27BQ5VT28 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM27BQ5VT28 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM27BQ5VT28 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM27BQ5VT28 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM27BQ5VT28 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FAM27BQ5VT28 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FAM27BQ5VT28 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
FAM27BQ5VT28 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.4■□□□□ 0.06
FAM27BQ5VT28 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.4■□□□□ 0.06
FAM27BQ5VT28 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM27BQ5VT28 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FAM27BQ5VT28 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.4■□□□□ 0.06
FAM27BQ5VT28 INTS4P1-201ENST00000438455 1935 ntBASIC15.4■□□□□ 0.06
FAM27BQ5VT28 KRT8P10-201ENST00000450021 1447 ntBASIC15.4■□□□□ 0.06
FAM27BQ5VT28 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms