Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
SNAPC4Q5SXM2 AC009949.1-201ENST00000623048 1830 ntBASIC28.47■■■□□ 2.15
SNAPC4Q5SXM2 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC28.47■■■□□ 2.15
SNAPC4Q5SXM2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
SNAPC4Q5SXM2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC28.47■■■□□ 2.15
SNAPC4Q5SXM2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
SNAPC4Q5SXM2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC28.47■■■□□ 2.15
SNAPC4Q5SXM2 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SNAPC4Q5SXM2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SNAPC4Q5SXM2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC28.46■■■□□ 2.15
SNAPC4Q5SXM2 TMPRSS11CP-201ENST00000453277 683 ntBASIC28.46■■■□□ 2.15
SNAPC4Q5SXM2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC28.46■■■□□ 2.15
SNAPC4Q5SXM2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SNAPC4Q5SXM2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC28.46■■■□□ 2.15
SNAPC4Q5SXM2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SNAPC4Q5SXM2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC28.46■■■□□ 2.15
SNAPC4Q5SXM2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SNAPC4Q5SXM2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SNAPC4Q5SXM2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SNAPC4Q5SXM2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC28.46■■■□□ 2.15
SNAPC4Q5SXM2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
SNAPC4Q5SXM2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC28.46■■■□□ 2.15
SNAPC4Q5SXM2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC28.46■■■□□ 2.15
SNAPC4Q5SXM2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
SNAPC4Q5SXM2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC28.45■■■□□ 2.15
SNAPC4Q5SXM2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
SNAPC4Q5SXM2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
SNAPC4Q5SXM2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.15
SNAPC4Q5SXM2 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC28.45■■■□□ 2.14
SNAPC4Q5SXM2 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
SNAPC4Q5SXM2 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC28.45■■■□□ 2.14
SNAPC4Q5SXM2 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
SNAPC4Q5SXM2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.14
SNAPC4Q5SXM2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC28.45■■■□□ 2.14
SNAPC4Q5SXM2 AC027307.3-201ENST00000594262 1100 ntBASIC28.45■■■□□ 2.14
SNAPC4Q5SXM2 AC129492.6-201ENST00000611383 1305 ntBASIC28.45■■■□□ 2.14
SNAPC4Q5SXM2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC28.45■■■□□ 2.14
SNAPC4Q5SXM2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
SNAPC4Q5SXM2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
SNAPC4Q5SXM2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC28.44■■■□□ 2.14
SNAPC4Q5SXM2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
SNAPC4Q5SXM2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC28.44■■■□□ 2.14
SNAPC4Q5SXM2 PIN1P1-201ENST00000412108 996 ntBASIC28.44■■■□□ 2.14
SNAPC4Q5SXM2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
SNAPC4Q5SXM2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC28.44■■■□□ 2.14
SNAPC4Q5SXM2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC28.44■■■□□ 2.14
SNAPC4Q5SXM2 AC010336.2-201ENST00000564226 506 ntBASIC28.44■■■□□ 2.14
SNAPC4Q5SXM2 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC28.44■■■□□ 2.14
SNAPC4Q5SXM2 CD7-202ENST00000578509 925 ntTSL 3 BASIC28.44■■■□□ 2.14
SNAPC4Q5SXM2 AL606495.2-201ENST00000605867 535 ntBASIC28.44■■■□□ 2.14
SNAPC4Q5SXM2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
SNAPC4Q5SXM2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC28.44■■■□□ 2.14
SNAPC4Q5SXM2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
SNAPC4Q5SXM2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC28.44■■■□□ 2.14
SNAPC4Q5SXM2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC28.44■■■□□ 2.14
SNAPC4Q5SXM2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
SNAPC4Q5SXM2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
SNAPC4Q5SXM2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SNAPC4Q5SXM2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
SNAPC4Q5SXM2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SNAPC4Q5SXM2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC28.43■■■□□ 2.14
SNAPC4Q5SXM2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SNAPC4Q5SXM2 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SNAPC4Q5SXM2 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC28.43■■■□□ 2.14
SNAPC4Q5SXM2 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
SNAPC4Q5SXM2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC28.43■■■□□ 2.14
SNAPC4Q5SXM2 TSSK5P-201ENST00000423978 907 ntBASIC28.43■■■□□ 2.14
SNAPC4Q5SXM2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SNAPC4Q5SXM2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC28.43■■■□□ 2.14
SNAPC4Q5SXM2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SNAPC4Q5SXM2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC28.43■■■□□ 2.14
SNAPC4Q5SXM2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC28.43■■■□□ 2.14
SNAPC4Q5SXM2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
SNAPC4Q5SXM2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC28.42■■■□□ 2.14
SNAPC4Q5SXM2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SNAPC4Q5SXM2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
SNAPC4Q5SXM2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC28.42■■■□□ 2.14
SNAPC4Q5SXM2 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC28.42■■■□□ 2.14
SNAPC4Q5SXM2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC28.42■■■□□ 2.14
SNAPC4Q5SXM2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
SNAPC4Q5SXM2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC28.42■■■□□ 2.14
SNAPC4Q5SXM2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
SNAPC4Q5SXM2 AC126763.1-201ENST00000552015 2118 ntBASIC28.42■■■□□ 2.14
SNAPC4Q5SXM2 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 AC009118.2-201ENST00000613275 655 ntBASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SNAPC4Q5SXM2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms