Protein–RNA interactions for Protein: Q4V339

CBWD6, COBW domain-containing protein 6, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6Q4V339 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBWD6Q4V339 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBWD6Q4V339 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CBWD6Q4V339 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBWD6Q4V339 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CBWD6Q4V339 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CBWD6Q4V339 KRT8P10-201ENST00000450021 1447 ntBASIC19.01■□□□□ 0.63
CBWD6Q4V339 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBWD6Q4V339 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CBWD6Q4V339 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CBWD6Q4V339 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBWD6Q4V339 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBWD6Q4V339 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBWD6Q4V339 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBWD6Q4V339 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.01■□□□□ 0.63
CBWD6Q4V339 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBWD6Q4V339 MINOS1P3-201ENST00000457048 203 ntBASIC19.01■□□□□ 0.63
CBWD6Q4V339 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.01■□□□□ 0.63
CBWD6Q4V339 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
CBWD6Q4V339 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.01■□□□□ 0.63
CBWD6Q4V339 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.01■□□□□ 0.63
CBWD6Q4V339 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CBWD6Q4V339 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBWD6Q4V339 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBWD6Q4V339 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CBWD6Q4V339 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.01■□□□□ 0.63
CBWD6Q4V339 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
CBWD6Q4V339 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.01■□□□□ 0.63
CBWD6Q4V339 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CBWD6Q4V339 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19■□□□□ 0.63
CBWD6Q4V339 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CBWD6Q4V339 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CBWD6Q4V339 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19■□□□□ 0.63
CBWD6Q4V339 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CBWD6Q4V339 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CBWD6Q4V339 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CBWD6Q4V339 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CBWD6Q4V339 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CBWD6Q4V339 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CBWD6Q4V339 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CBWD6Q4V339 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19■□□□□ 0.63
CBWD6Q4V339 UPK3BP1-201ENST00000428678 509 ntBASIC19■□□□□ 0.63
CBWD6Q4V339 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CBWD6Q4V339 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19■□□□□ 0.63
CBWD6Q4V339 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19■□□□□ 0.63
CBWD6Q4V339 AC096582.2-201ENST00000510860 516 ntBASIC19■□□□□ 0.63
CBWD6Q4V339 AC092329.2-201ENST00000598402 547 ntBASIC19■□□□□ 0.63
CBWD6Q4V339 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19■□□□□ 0.63
CBWD6Q4V339 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CBWD6Q4V339 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19■□□□□ 0.63
CBWD6Q4V339 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CBWD6Q4V339 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CBWD6Q4V339 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CBWD6Q4V339 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19■□□□□ 0.63
CBWD6Q4V339 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CBWD6Q4V339 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CBWD6Q4V339 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CBWD6Q4V339 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19■□□□□ 0.63
CBWD6Q4V339 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19■□□□□ 0.63
CBWD6Q4V339 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19■□□□□ 0.63
CBWD6Q4V339 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CBWD6Q4V339 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CBWD6Q4V339 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19■□□□□ 0.63
CBWD6Q4V339 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD6Q4V339 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD6Q4V339 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD6Q4V339 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CBWD6Q4V339 AP001094.4-201ENST00000579008 2176 ntBASIC18.99■□□□□ 0.63
CBWD6Q4V339 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD6Q4V339 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.99■□□□□ 0.63
CBWD6Q4V339 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD6Q4V339 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD6Q4V339 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CBWD6Q4V339 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
CBWD6Q4V339 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD6Q4V339 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD6Q4V339 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.99■□□□□ 0.63
CBWD6Q4V339 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD6Q4V339 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD6Q4V339 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD6Q4V339 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD6Q4V339 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CBWD6Q4V339 RCN1P2-201ENST00000398357 915 ntBASIC18.99■□□□□ 0.63
CBWD6Q4V339 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD6Q4V339 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD6Q4V339 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.99■□□□□ 0.63
CBWD6Q4V339 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD6Q4V339 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.99■□□□□ 0.63
CBWD6Q4V339 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.99■□□□□ 0.63
CBWD6Q4V339 INTS4P1-201ENST00000438455 1935 ntBASIC18.99■□□□□ 0.63
CBWD6Q4V339 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD6Q4V339 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD6Q4V339 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CBWD6Q4V339 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD6Q4V339 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD6Q4V339 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBWD6Q4V339 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.98■□□□□ 0.63
CBWD6Q4V339 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CBWD6Q4V339 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CBWD6Q4V339 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms