Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 GPS2P2-201ENST00000430745 888 ntBASIC21.71■■□□□ 1.07
DDR1Q08345 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC21.71■■□□□ 1.07
DDR1Q08345 AC005237.2-201ENST00000434368 219 ntBASIC21.71■■□□□ 1.07
DDR1Q08345 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
DDR1Q08345 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC21.71■■□□□ 1.07
DDR1Q08345 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC21.71■■□□□ 1.07
DDR1Q08345 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC21.71■■□□□ 1.07
DDR1Q08345 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC21.71■■□□□ 1.07
DDR1Q08345 POLD4-211ENST00000539074 714 ntTSL 3 BASIC21.71■■□□□ 1.07
DDR1Q08345 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDR1Q08345 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDR1Q08345 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.71■■□□□ 1.07
DDR1Q08345 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDR1Q08345 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DDR1Q08345 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC21.71■■□□□ 1.07
DDR1Q08345 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
DDR1Q08345 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DDR1Q08345 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.71■■□□□ 1.07
DDR1Q08345 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
DDR1Q08345 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDR1Q08345 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDR1Q08345 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDR1Q08345 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDR1Q08345 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDR1Q08345 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC21.7■■□□□ 1.06
DDR1Q08345 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDR1Q08345 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.7■■□□□ 1.06
DDR1Q08345 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.7■■□□□ 1.06
DDR1Q08345 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDR1Q08345 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDR1Q08345 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDR1Q08345 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDR1Q08345 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDR1Q08345 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.69■■□□□ 1.06
DDR1Q08345 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.69■■□□□ 1.06
DDR1Q08345 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDR1Q08345 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDR1Q08345 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.69■■□□□ 1.06
DDR1Q08345 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDR1Q08345 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDR1Q08345 METTL26-204ENST00000397665 558 ntTSL 2 BASIC21.69■■□□□ 1.06
DDR1Q08345 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC21.69■■□□□ 1.06
DDR1Q08345 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.69■■□□□ 1.06
DDR1Q08345 CNN2P2-201ENST00000443536 909 ntBASIC21.69■■□□□ 1.06
DDR1Q08345 CNN2P3-201ENST00000450201 906 ntBASIC21.69■■□□□ 1.06
DDR1Q08345 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC21.69■■□□□ 1.06
DDR1Q08345 AC079140.1-201ENST00000508039 487 ntBASIC21.69■■□□□ 1.06
DDR1Q08345 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.69■■□□□ 1.06
DDR1Q08345 AC087641.1-201ENST00000557561 1021 ntBASIC21.69■■□□□ 1.06
DDR1Q08345 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDR1Q08345 AC116407.2-201ENST00000613639 860 ntBASIC21.69■■□□□ 1.06
DDR1Q08345 AL136317.3-201ENST00000618497 906 ntBASIC21.69■■□□□ 1.06
DDR1Q08345 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.69■■□□□ 1.06
DDR1Q08345 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.69■■□□□ 1.06
DDR1Q08345 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDR1Q08345 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDR1Q08345 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.69■■□□□ 1.06
DDR1Q08345 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.69■■□□□ 1.06
DDR1Q08345 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDR1Q08345 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDR1Q08345 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDR1Q08345 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
DDR1Q08345 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
DDR1Q08345 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDR1Q08345 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDR1Q08345 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDR1Q08345 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDR1Q08345 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.68■■□□□ 1.06
DDR1Q08345 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.68■■□□□ 1.06
DDR1Q08345 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDR1Q08345 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDR1Q08345 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDR1Q08345 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDR1Q08345 AL592309.1-201ENST00000443127 649 ntBASIC21.68■■□□□ 1.06
DDR1Q08345 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
DDR1Q08345 SPDYE11-202ENST00000450699 704 ntBASIC21.68■■□□□ 1.06
DDR1Q08345 AC069335.1-201ENST00000489972 472 ntBASIC21.68■■□□□ 1.06
DDR1Q08345 AL512356.2-201ENST00000546955 174 ntBASIC21.68■■□□□ 1.06
DDR1Q08345 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.68■■□□□ 1.06
DDR1Q08345 SPDYE9P-201ENST00000570642 692 ntBASIC21.68■■□□□ 1.06
DDR1Q08345 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.68■■□□□ 1.06
DDR1Q08345 SPDYE10P-202ENST00000612005 668 ntBASIC21.68■■□□□ 1.06
DDR1Q08345 SPDYE8P-202ENST00000612377 668 ntBASIC21.68■■□□□ 1.06
DDR1Q08345 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.68■■□□□ 1.06
DDR1Q08345 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC21.68■■□□□ 1.06
DDR1Q08345 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.68■■□□□ 1.06
DDR1Q08345 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDR1Q08345 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC21.68■■□□□ 1.06
DDR1Q08345 AC093677.2-201ENST00000600169 1863 ntBASIC21.68■■□□□ 1.06
DDR1Q08345 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.68■■□□□ 1.06
DDR1Q08345 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDR1Q08345 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.68■■□□□ 1.06
DDR1Q08345 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
DDR1Q08345 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDR1Q08345 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDR1Q08345 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDR1Q08345 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DDR1Q08345 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDR1Q08345 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDR1Q08345 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms